Gene Information

Name : W5S_3857 (W5S_3857)
Accession : YP_006284792.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Quaternary ammonium compound-resistance protein QacE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4153327 - 4153743 bp
Length : 417 bp
Strand : +
Note : -

DNA sequence : 
ATGTCACCCAGAAAGCAGTCATGGCTGTGGATGTTATTCGTCATCTTGTCAGAAACGTCCGCCACGTCCACGTTAAAAAT
GTTTGATAATAGTCAGGGGTCGACAAAAATAGCGTTATTAGCCGTTATTATTCTGCTGTACTGCATTTGTTATTATTCAC
TATCAAAAGCCGTAAAACATCTTCCCGTAGGTCTGGCCTATGCCACCTGGTCTGGCACCGGTATTTTATTAGTTTCGACG
CTCAGTATTATTTTTTACGGCCAACACCCCGATATTCCTGCCATCATTGGGATGGTTGTGATTGCTACTGGCATAGCCAT
CATGAATCTCTTTTCTAAAATGGGCGCAGATGAACAGCCCGAGGCGATAACAAGCGGCGATCAGAATCAGCCATTAGATA
CAAAAATCATTCATTAA

Protein sequence : 
MSPRKQSWLWMLFVILSETSATSTLKMFDNSQGSTKIALLAVIILLYCICYYSLSKAVKHLPVGLAYATWSGTGILLVST
LSIIFYGQHPDIPAIIGMVVIATGIAIMNLFSKMGADEQPEAITSGDQNQPLDTKIIH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42068.1 hypothetical protein Not tested PAI II 536 Protein 2e-43 77

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_3857 YP_006284792.1 Quaternary ammonium compound-resistance protein QacE BAC0324 Protein 9e-14 45
W5S_3857 YP_006284792.1 Quaternary ammonium compound-resistance protein QacE NC_010410.6003348.p0 Protein 1e-11 44
W5S_3857 YP_006284792.1 Quaternary ammonium compound-resistance protein QacE BAC0002 Protein 1e-11 44
W5S_3857 YP_006284792.1 Quaternary ammonium compound-resistance protein QacE BAC0150 Protein 4e-12 43
W5S_3857 YP_006284792.1 Quaternary ammonium compound-resistance protein QacE CP001138.1.gene1489. Protein 3e-13 42
W5S_3857 YP_006284792.1 Quaternary ammonium compound-resistance protein QacE NC_002695.1.913273.p Protein 6e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_3857 YP_006284792.1 Quaternary ammonium compound-resistance protein QacE VFG1587 Protein 8e-44 77