Gene Information

Name : W5S_0384 (W5S_0384)
Accession : YP_006281383.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : IS630 transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 417613 - 418650 bp
Length : 1038 bp
Strand : -
Note : -

DNA sequence :
ATGCCGATCATAGCAGCAATCCCTGATGAAGAACGACGACTAATGCGTAAAGAAGCCCAACAAACACATGATAAAAACTA
TTCCAGACGACTCATCGCCATATTGATGTTACATAAGGGAATGACCGTCACCGATGTTGCCAGACTGCTCTGTGCGGCTC
GCTCATCCGTTGGAAGATGGATAAATTGGTTTACTTTACAGGGTGTTGAAGGTCTAAAGAGCCTCAAATCCGGACGAGCA
CCACGCTGGCCTGTCGCAGATATCCTGCATACTCTACCGCTTCTGGTTCAGCGTTCTCCTCAGGATTTTGGCTGGCTGCG
CTCCCGCTGGAGCACTGAGCTGTTGGCTCTTATCGTTAATCGGCTTTTTAATGCAGAGCTTCATCCTGCCACGTTGCACC
GCTACCTGAGACGAGCGGGTATTGTCTGGCGCAGAGCCGCGCCAACACTGAAAATCAAAGACCCGCATTATGAGGAAAAG
CGACTCGCCATCGAACAGGCGGTCGTCCGGAAGCAGCCGGCCCATCCGGTATTTTATCAGGATGAAGTGGATATCGACCT
GAACCCGAAAATCGGCGCGGACTGGATGCTCAAAGGGCAACAGAAACGTATTACTACGCCGGGACATAACCAAAAGTATT
ATCTGGCAGGGGCACTGCATTCGGATACGGGACGAGTTCATTACGTCGGCGACAGTAAAAAGTGTTCTGATTTATTTATC
AATCTGTTAGAGACATTACGGCGGACATATCGGCGAGCGAAAACCATTACGCTGGTCGTTGATAACTACATCATTCATAA
AAGCCGCAAGGTGGAAAGGTGGCTGGAAAAAAATACGAAGTTCCGGTTGCTGTTCCTGCCCACGTATTCGCCGTGGCTGA
ATCCAATCGAGTTGCTGTGGTTGTCGTTACACGAGACCATAACGCGTAACCATCAGTGCCGGTATATGTGGCAGTTACTG
GCACAGGTAAAGCTATTTATGAATGCCGCCTCGCCGTTCCCCGGTAATCAGCATGGTCTGGCTAAAGTGGAGCGGTAA

Protein sequence :
MPIIAAIPDEERRLMRKEAQQTHDKNYSRRLIAILMLHKGMTVTDVARLLCAARSSVGRWINWFTLQGVEGLKSLKSGRA
PRWPVADILHTLPLLVQRSPQDFGWLRSRWSTELLALIVNRLFNAELHPATLHRYLRRAGIVWRRAAPTLKIKDPHYEEK
RLAIEQAVVRKQPAHPVFYQDEVDIDLNPKIGADWMLKGQQKRITTPGHNQKYYLAGALHSDTGRVHYVGDSKKCSDLFI
NLLETLRRTYRRAKTITLVVDNYIIHKSRKVERWLEKNTKFRLLFLPTYSPWLNPIELLWLSLHETITRNHQCRYMWQLL
AQVKLFMNAASPFPGNQHGLAKVER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api42 CAF28516.1 DNA binding protein Not tested YAPI Protein 4e-105 69
unnamed AAP70294.1 TnpA-like protein Not tested HPI Protein 9e-109 65
tnpA AFL65914.1 transposase Not tested SGI1-J6 Protein 1e-94 60
IS630-like CAI43817.1 putative transposase Not tested LEE Protein 2e-77 59
Z4330 NP_289555.1 transposase Not tested OI-122 Protein 3e-77 59
unnamed AAL57563.1 putative transposase Not tested LEE Protein 2e-77 59
st46 CAC81884.1 ST46 protein Not tested LEE II Protein 2e-77 59