Gene Information

Name : W5S_3802 (W5S_3802)
Accession : YP_006284737.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Single-stranded DNA-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4092716 - 4093258 bp
Length : 543 bp
Strand : +
Note : -

DNA sequence : 
ATGGCCAGCAGAGGCGTTAATAAAGTGATTCTTGTCGGGAATCTGGGTCAAGACCCGGAAGTCCGCTATATGCCGAATGG
TGGTGCAGTTGCCAACATCACGCTGGCTACGTCGGAAAGCTGGCGTGACAAGCAAACCGGTGAGCAGAAAGAGAAGACCG
AATGGCACCGTGTGGTTCTGTTCGGCAAACTGGCAGAAGTTGCAGGCGAATACCTGCGCAAAGGCTCTCAGGTTTATATC
GAAGGCGCACTGCAAACCCGTAAATGGGCCGATCAGGCTGGCGTAGAGCGCTACACCACCGAAGTCGTTGTTAACGTCGG
CGGCACCATGCAGATGCTGGGTGGACGCCAGGGCGGCGGCGCACCAGCAGGCGGTAATGCAGGTGGCGGTCAGCAGCAAG
GCGGTTGGGGTCAACCTCAGCAGCCGCAGGGTGGCAACCAATTCAGCGGCGGTGCGCAAGCTCAGCAGCGTCCGGCACAG
AACAGCGCGCCCGCACAAAGTAACGAACCGCCAATGGATTTCGACGACGACATTCCGTTCTAG

Protein sequence : 
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQKEKTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGALQTRKWADQAGVERYTTEVVVNVGGTMQMLGGRQGGGAPAGGNAGGGQQQGGWGQPQQPQGGNQFSGGAQAQQRPAQ
NSAPAQSNEPPMDFDDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 1e-41 60
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 1e-41 60
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 9e-42 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_3802 YP_006284737.1 Single-stranded DNA-binding protein VFG0576 Protein 1e-42 72