Gene Information

Name : W5S_3674 (W5S_3674)
Accession : YP_006284609.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : VgrG protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3943440 - 3945617 bp
Length : 2178 bp
Strand : +
Note : -

DNA sequence :
ATGTTGAATGCAAAGAGGCCATCGGAAGGCCTTAGATTTACGTTAAATGTAGGAAATTTGCCGCCTGAAACCTTTATCGT
TGTGGGATTCACGCTGAGTGAGCAGTTTTCCCTGCCTTTCGTGCTTAATCTTGAGGCAGTGAGCACTCATTCCAGCGTAG
CGTTTGGCACGGTGCTGGATAGCACCGCCACACTGACCATCAGGCAAGATACCGAGGTGCTACGCACTGTCAATGGTATC
GTCAGTGAGATGGAACAAGGCGATGCCGGCTTACACCAAACCCGCTACCGCATCACCATACACCCCGCACTCTGGCGAGC
CGGACTGGTCAGACATTCACGTATTTTCCAGCAGCAAAGTGTTCAAGAAATACTGGAGACATTGCTCAAGAAACATCTCA
TCAGTGACTATGCTTTTGCTCTACGTTACCCCCGAGCAGTGCGTGAATTCTGTGTGCAATACCAGGAAAGCGATGCCGAC
TTTATCAATCGTCTGGCGGCAGAAGAAGGGATGTTCTATTTTTTCGAGCATCAACATGGCAAGCATACGCTCGTTTTTGC
CGATGACTGTGCAGCACTGAATGCAGGACCGACGCTGCCCTACCGCCCTGAAAAACCAATCCGTTCAGATGAATGGGGTG
TGACCACATTCCGTCGCCGGGAAAGCCTACGCCCTTCCGATGTATTGCTGAAAGATTACACCTTTAAAAAGCCTCGCTGG
CCGGCAGAATCTCGTGAGTATGCCCGAGATACCGAGCACCAATCAGGTCGCTACCTTCACTATGACTACCCCGGGCGCTA
TAAAGGCACCGGGCCCACCGGAGAACATTTTGCACGGTGGCGTATTCAGGCCCTCCGCAACAGCGCTCATCAAGGGGAAG
GCGCAACCAATTGCCCGGCACTTCAACCGGGGATCCGTTTTACTCTGGAAGACCATCCACTGGAAACGCATAACACGCGC
TGGCAAATCACACACTCCACCTACATAGGAAGGCAACCCCAAGCGCTGGAAACCGAAGCCGGGGAAGAGGGAACGACGCT
GATGGGGCAATTCGCCTTTATCCCACAGGATCAAACCTGGCGTCCACTTTCACTGCCCAAACCTCGTATCGATGGGGCAC
AGGTTGCGATTGTCACAGGCCCAGACACCGAAGAAATTTTTTGTGATGAATACGGTCGCGTCAGAGTCCGTTTTCTCTGG
GATTTATCCGACAAGACAGACGACAGCAGCTCCTGCTGGGTACGAGTTTCTCACCCATGGGCGGGACAAGGCTGGGGTAT
GTCAGCTATTCCGCGCATCGGCCATGAGGTGATTGTTGAGTTTCTTAACGGCGACCCCGATCAGCCCGTCATTATTGGGC
GCACCTACCACGTCAGCAATCTGCCCCCAGGTAACCTGCCAGGCACGAAAACCCAGATGACGCTTCGTTCACAAACGCAT
AAAGGTGACGGGTTCAATGAACTGCGATTTGAGGACGAACGAGACAGGGAGGAAATCTATATTCATGCCCAACAGGACAT
GAACACTGACGTGCTACGGGATCAAACGACAACGATCAACCGGGATATGCAACTGACGGTCGATAACAACCGAACCTCAG
TGATTAAAGTGGACGATGACGAATCCGTAGGCGGATACCAAACGCTCAGCGTAACGAAAGATCAAAGCATCACGATTGAA
GGGCAGCACAGCACGGTCGTCAAGAAGAGCCGTTTTCTTGAGGTGACGGACAATGATTCCCTGAAGGTTGGCAAGCACAT
CTCTATCCATTCCGACAGCGGCCAAATTTTGATTGGTAATGCTGGAGGGAGGATTGTCATTGATCCCATCGGCAATATCC
GCATCGAAGGAGTAAGTATCACTCTGGCGGAACATTCTGCGGGTGGTATGCCACCGAGCCCACTATTCACCTATTCAGCG
CGTTATACGTTATTCAACGAACATACCGGAACCCCCTTGATCAATGCGCCTTACACCATCAAAGGGGCCAATGGTCAGAT
CGTTTCTGGTAAAACCGACGCGCAGGGCAGAACCCTGATGGTGCGAACGGAAAAAGAAGACAACCTGCAACTCGATATCC
CGGAAACCCAAAAACCGGTTAAAACGCGCTATTACCAGGCCAGTAACAACGCACAGGTCGAGCGTGTAATGGAATTCAAG
GAGTCACACCATGAGTAA

Protein sequence :
MLNAKRPSEGLRFTLNVGNLPPETFIVVGFTLSEQFSLPFVLNLEAVSTHSSVAFGTVLDSTATLTIRQDTEVLRTVNGI
VSEMEQGDAGLHQTRYRITIHPALWRAGLVRHSRIFQQQSVQEILETLLKKHLISDYAFALRYPRAVREFCVQYQESDAD
FINRLAAEEGMFYFFEHQHGKHTLVFADDCAALNAGPTLPYRPEKPIRSDEWGVTTFRRRESLRPSDVLLKDYTFKKPRW
PAESREYARDTEHQSGRYLHYDYPGRYKGTGPTGEHFARWRIQALRNSAHQGEGATNCPALQPGIRFTLEDHPLETHNTR
WQITHSTYIGRQPQALETEAGEEGTTLMGQFAFIPQDQTWRPLSLPKPRIDGAQVAIVTGPDTEEIFCDEYGRVRVRFLW
DLSDKTDDSSSCWVRVSHPWAGQGWGMSAIPRIGHEVIVEFLNGDPDQPVIIGRTYHVSNLPPGNLPGTKTQMTLRSQTH
KGDGFNELRFEDERDREEIYIHAQQDMNTDVLRDQTTTINRDMQLTVDNNRTSVIKVDDDESVGGYQTLSVTKDQSITIE
GQHSTVVKKSRFLEVTDNDSLKVGKHISIHSDSGQILIGNAGGRIVIDPIGNIRIEGVSITLAEHSAGGMPPSPLFTYSA
RYTLFNEHTGTPLINAPYTIKGANGQIVSGKTDAQGRTLMVRTEKEDNLQLDIPETQKPVKTRYYQASNNAQVERVMEFK
ESHHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 3e-152 51
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-115 45
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 5e-115 45