Gene Information

Name : W5S_3550 (W5S_3550)
Accession : YP_006284492.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3814573 - 3815154 bp
Length : 582 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCAGGGATTATCTCAGGCAACAAATGCGTTATTGACGCACATCTTAATGGAACTGAAGTCAGGAAATATCCGTCG
TTGTGAAGCTCTGGGCATGACGATGGAAGAGGTTCGTCAATTAAGCCAACTGACGGTGGACGATCTGTATTACCTGACGC
AAAGCAGCGTATCCGTACTCAATTTTCAGATTAATCACGACAATTTTTGGTCAATGGTTAACCAGGCTCGAACTGAACAA
AAACGGTTACAGCGAATTGATCGCGCCCTGGCGTTAGGTGGCTCAATCGAACTGATGCAATTCTATTTTGGTCTGTCAAC
ATCGGAAGTCAGCTCGAGGCGCCGTTTAAATGGTGTCGAAACACGGCAGGGGAGAGTTCAGGCCCCCACGGAAGAAGAAG
ACGCTGCACTATGGGAGCAATGGCGTAGTTCTGGACTGTCATCGCCTGATTCACATGAAGCACTGGACGTCATGATGTTG
GCGGCGGAACAGCAGAATGTTTCTCTCACTGCGGTCTGGACTCGTGTTAATGCCTGGTGCCGTGAAGCGGTACTGGAAAG
AAAGGAAAAGGTGGGAGGCTGA

Protein sequence :
MSQGLSQATNALLTHILMELKSGNIRRCEALGMTMEEVRQLSQLTVDDLYYLTQSSVSVLNFQINHDNFWSMVNQARTEQ
KRLQRIDRALALGGSIELMQFYFGLSTSEVSSRRRLNGVETRQGRVQAPTEEEDAALWEQWRSSGLSSPDSHEALDVMML
AAEQQNVSLTAVWTRVNAWCREAVLERKEKVGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3745 YP_001402699.1 hypothetical protein Not tested YAPI Protein 4e-67 77
api4 CAF28478.1 hypothetical protein Not tested YAPI Protein 4e-67 77
YE3512 YP_001007674.1 hypothetical protein Not tested YAPI Protein 1e-67 76
STY4526 NP_458621.1 hypothetical protein Not tested SPI-7 Protein 4e-47 52
t4231 NP_807833.1 hypothetical protein Not tested SPI-7 Protein 4e-47 52
PMI2637 YP_002152339.1 hypothetical protein Not tested Not named Protein 3e-42 44