Gene Information

Name : W5S_3546 (W5S_3546)
Accession : YP_006284488.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3812610 - 3813908 bp
Length : 1299 bp
Strand : -
Note : -

DNA sequence :
ATGATGGGATTACCTGCTGACAGTGTTATCGCATTCACACTCCAGAGAATGGAGGAGGGTATTTCCCGGCAGGGAAATAG
TGATCCCTCAAGTCTAATCAATGAACGTAGCGGATTACTTTATCTGGGGAACGTGCATGATGCCGTTCCCCGGCGACTGT
TTCTGGATAGCAGGCTGAGCCCGCTGGATAAAACAGCATGGGTGATGATCCGTTTGTATGCCCAGCAAAATGATGGTGCG
GTATTTCCTACATACGATGAGCTGCAACTTCAGTTGGCTTCACCTCACGCCGAGAAAGCCTCGCGTGAAACCATCAGCCG
TACGTTGCTAATGTTGCGAATAACCGGCTGGCTTAGTCTTTGTAAACGTGTGCGCGATGAGTATGGGCGCGTACGCGGGA
ATATCTACGCTCAACATGATGAACCGCTGAGCTGCCGTGATGCGGAAACGTTCGACCCGGGCTGGCTGGATTTGGTTGCA
CGCAGCTGCGAACATAAGAATAAATCGGTACGAATAACCGCGCTCAATGTTTTGGAGGCGATCCGCAACGACCCCTCCAT
GCGACATCGTCATTCCAGAGTAGCCATGATTGAGGCACGTTTGGATTCACCATCAACTCCCTCTCAACTGGCATCACTCC
AGCGCGGCATGCAGCCGGGTTCGAATTCCGAACCCAGTAAAAAACAAGGTGAGATAAGAGAGAAATCACTGAGTTCGGAA
TCCGAATTTAGTGATGAAAATAGCAATAATACACAGAGTTCGAATTCCGAACTCAGTCTAAAATCAATAGGTTATAACCA
AGTTCGAAAATCGAACTGTAACGTACGTAGTTTCACACACAGTGTGAATAAAAAAACGTACGTACCGGAAAGCGAGCACA
GTTTGGCACTGCCGGAAGTATTGCTCTGCCGTATCACAGCCGATGATGCTGATATGCTGACCAGACAACTCACTGCGTTG
CCTGCTGAGCAAGCCTCTGCTCTGCTGACTATGCTGAATACGCAGCTCAAACGCGGGCAGTTAGCTAACCCGTTTGGGTG
GCTGTTGTCGATGATGAAATGTGCCCGGGAAGGGCGGCTGGTGCTGCCTGCTGAGCAAACAGAGCAATCAGCAGGAAGCG
TAACGCTTTCTGAAACGGCGAAGGGAAGAGCGTCTGCAGCAATCACACCAATGGTGGACCGTCCCGCTACTGAGCTGCCA
GAAAGCCTTCCCGCACAGGCAACTTCTAAGGCAAGTCAGGAAAGAGTTTCCAACTTGGTTGCTGATATCAGAGCCAGAAT
ATTGACCGCTGGAAAATAG

Protein sequence :
MMGLPADSVIAFTLQRMEEGISRQGNSDPSSLINERSGLLYLGNVHDAVPRRLFLDSRLSPLDKTAWVMIRLYAQQNDGA
VFPTYDELQLQLASPHAEKASRETISRTLLMLRITGWLSLCKRVRDEYGRVRGNIYAQHDEPLSCRDAETFDPGWLDLVA
RSCEHKNKSVRITALNVLEAIRNDPSMRHRHSRVAMIEARLDSPSTPSQLASLQRGMQPGSNSEPSKKQGEIREKSLSSE
SEFSDENSNNTQSSNSELSLKSIGYNQVRKSNCNVRSFTHSVNKKTYVPESEHSLALPEVLLCRITADDADMLTRQLTAL
PAEQASALLTMLNTQLKRGQLANPFGWLLSMMKCAREGRLVLPAEQTEQSAGSVTLSETAKGRASAAITPMVDRPATELP
ESLPAQATSKASQERVSNLVADIRARILTAGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api5 CAF28479.1 hypothetical protein Not tested YAPI Protein 1e-115 60
YE3511 YP_001007673.1 hypothetical protein Not tested YAPI Protein 3e-117 59
YpsIP31758_3743 YP_001402697.1 hypothetical protein Not tested YAPI Protein 7e-117 59
PMI2635 YP_002152337.1 hypothetical protein Not tested Not named Protein 5e-77 49
STY4528 NP_458622.1 hypothetical protein Not tested SPI-7 Protein 1e-72 45
t4232 NP_807834.1 hypothetical protein Not tested SPI-7 Protein 1e-72 45