Gene Information

Name : W5S_3543 (W5S_3543)
Accession : YP_006284485.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3808416 - 3808919 bp
Length : 504 bp
Strand : -
Note : -

DNA sequence :
ATGACTGCAAATAAATCTACCCAGAATCAAGCTACTAGCACTCAAAATGGCAAAAGCAATGAGTACTTCAATCTGAATGT
TACTGGATTGGGGTATCTGAGCGATATTCGCCATGTTACTGGACCGAATGGCCCATTCATCAGCTGTGTCATCAATGCCT
TAAGTGGTCAGAAAGACAATGCGAATTATGTTCGCTTTGACGTGACCCCAGCAGGTAAAGAGGCCATCGCTTTGATTAAA
CGCTGCGAAAAAGCTGTTGATGAAGACAAAAAGGTGTTGATTAATTTCACACTGAGCAATCTGTCTCCCAGTATCTTTAC
TCTGAACTCTGGTGACCATGCCGGTGAACAACGTGTCAGCCTCAAAGCCCGTTTAATCAAGATCACCAGGATTAAAGTGG
GTCAAGAAGAAGTCTACAAAGCCGAGAAGTCTGATTCATCTGACTCCACGCCGATTCAGAACAGCCCTGCGGATTCTAAA
GCGTATGCGGAAAATTCGTTCTAA

Protein sequence :
MTANKSTQNQATSTQNGKSNEYFNLNVTGLGYLSDIRHVTGPNGPFISCVINALSGQKDNANYVRFDVTPAGKEAIALIK
RCEKAVDEDKKVLINFTLSNLSPSIFTLNSGDHAGEQRVSLKARLIKITRIKVGQEEVYKAEKSDSSDSTPIQNSPADSK
AYAENSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4534 NP_458625.1 hypothetical protein Not tested SPI-7 Protein 1e-42 57
t4235 NP_807837.1 hypothetical protein Not tested SPI-7 Protein 1e-42 57
PMI2628 YP_002152330.1 hypothetical protein Not tested Not named Protein 8e-44 57
api7 CAF28481.1 hypothetical protein Not tested YAPI Protein 2e-42 54
YpsIP31758_3740 YP_001402694.1 hypothetical protein Not tested YAPI Protein 3e-42 54
YE3509 YP_001007671.1 hypothetical protein Not tested YAPI Protein 4e-42 52
Pmu_03280 YP_005176227.1 hypothetical protein Not tested ICEPmu1 Protein 5e-27 44