|
Name : W5S_3522 (W5S_3522) Accession : YP_006284464.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Unknown Product : Lytic transglycosylase catalytic Function : - COG functional category : - COG ID : - EC number : - Position : 3790507 - 3791157 bp Length : 651 bp Strand : - Note : - DNA sequence : ATGGCAAATCGCAGCATTTTAATCAGTACGCTCGTCGTACTTGGGATAATGCATAGCGGTATTGTTAGCGCACAAAAACG TCCTGTTGCCTTGCAACAAATCCCAGCAGCATACCGACAAATTGCTAAAGATGCGCGCGTGCCAGCTGAGTCACTTTATT CACTCGCACTAACGGAAAGCTCACGTCTATTGCCGTACGGTGAGCGGCCATGGCCGTGGTCGATCAATGTTGCTGGAAAA ACGTATCGGTATGAGACACGCGAATTGGCATGGCAGGCGTTACGCCAGTTTATTCGCCAGACACCGCTAAAGAACATTGA TGTTGGGATCGCTCAGGTTAATTTAGGCTGGAACGGACATCGTTTTCGCTCTTTTTATGACGCATTTGAGCCGTTTACCA ATTTACGCGTTGCTGCACAAATCTTACGTGAGTGCTATGACGCCAAACCTGGTAGTTGGTTACGTGCCGCAGGGTGTTAT CACCGTCCTGCCGGCGGCCTGCCAGCTGAAAGGTATATGGCGATTGTGCGCCAAAAGCTGAAGCTTATTTCTCCAGTTCA GGAACCATTGGAGTCATCGCCGCCCATCCTACTTGCATCTTCCGAAGCAATTATTCCCAGCTACCAATTAACATGGATAG AGCCAGAATGA Protein sequence : MANRSILISTLVVLGIMHSGIVSAQKRPVALQQIPAAYRQIAKDARVPAESLYSLALTESSRLLPYGERPWPWSINVAGK TYRYETRELAWQALRQFIRQTPLKNIDVGIAQVNLGWNGHRFRSFYDAFEPFTNLRVAAQILRECYDAKPGSWLRAAGCY HRPAGGLPAERYMAIVRQKLKLISPVQEPLESSPPILLASSEAIIPSYQLTWIEPE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YE3494A | YP_001007653.1 | hypothetical protein | Not tested | YAPI | Protein | 2e-54 | 64 |
| api25 | CAF28499.1 | conserved hypothetical protein | Not tested | YAPI | Protein | 8e-61 | 61 |
| YpsIP31758_3720 | YP_001402674.1 | transglycosylase | Not tested | YAPI | Protein | 1e-60 | 61 |
| STY4559 | NP_458645.1 | hypothetical protein | Not tested | SPI-7 | Protein | 6e-44 | 55 |
| t4257 | NP_807855.1 | hypothetical protein | Not tested | SPI-7 | Protein | 6e-44 | 55 |
| PMI2591 | YP_002152310.1 | lytic transglycosylase | Not tested | Not named | Protein | 1e-47 | 54 |
| pph70 | CAI36111.1 | soluble lytic murein transglycosylase | Not tested | PPHGI-1 | Protein | 3e-25 | 48 |
| unnamed | ABR13378.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 3e-25 | 48 |
| EXA50 | ABD94659.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 7e-26 | 47 |
| ORF C67 | AAN62161.1 | conserved hypothetical protein | Not tested | PAGI-2(C) | Protein | 7e-23 | 47 |
| RL050 | AAP84175.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 1e-25 | 43 |
| ORF SG70 | AAN62292.1 | conserved hypothetical protein | Not tested | PAGI-3(SG) | Protein | 9e-23 | 41 |
