Gene Information

Name : W5S_3516 (W5S_3516)
Accession : YP_006284458.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Hcp protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3785810 - 3786328 bp
Length : 519 bp
Strand : -
Note : -

DNA sequence :
ATGCCAACTCCATGCTATATCAGCATCGAAGGGAAAACGCAGGGCAACATCACCGCAGGGGCTTTCACCTCTGACTCTGT
CGGCAATATCTACGTGCAGGGCCACGAAGACGAAATGCTGGTACAGGAATTCAAACACGTCGTCACCGTACCGACCGATC
CGCAGTCTGGCCAGCCATCTGGCCAGCGCGTTCACAAGCCGTTCAAATTCACCGTCGCGCTGAACAAAGCGGTTCCGCTG
CTGTACAACGCGCTGTCTACCGGTGAAATGCTGCCGACCGTCACCCTGAAGTGGTATCGCACCTCGGTGGAAGGCAAGCA
GGAGCACTTCTTCTCCACCATCCTGACCGACGCCACTATCGTGGATATTGACTGCCAGATGCCGCACTGCCAGGACCCGG
CCAAGCTGGACTACACCCAGTTAATCGAAGTGTCGCTGGCCTACCGCAAAATCGACTGGGAACACACCGTTGCAGGAACG
TCTGGTTCCGATGACTGGCGTGCACCGGTCGAAGCGTAA

Protein sequence :
MPTPCYISIEGKTQGNITAGAFTSDSVGNIYVQGHEDEMLVQEFKHVVTVPTDPQSGQPSGQRVHKPFKFTVALNKAVPL
LYNALSTGEMLPTVTLKWYRTSVEGKQEHFFSTILTDATIVDIDCQMPHCQDPAKLDYTQLIEVSLAYRKIDWEHTVAGT
SGSDDWRAPVEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec16 AAQ96710.1 Aec16 Not tested AGI-1 Protein 1e-65 81
aec16 YP_851428.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-65 81
HH0243 NP_859774.1 hypothetical protein Not tested HHGI1 Protein 6e-48 63