Gene Information

Name : W5S_3515 (W5S_3515)
Accession : YP_006284457.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : VgrG protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3783859 - 3785688 bp
Length : 1830 bp
Strand : -
Note : -

DNA sequence :
GTGGCAAACAGTACAGGACTACAGTTCACGGTAAAAGTCGGCGCACTGCCGGAAAGCACCTTTGCCGTGGTGGATTTTCA
GCTCAGCGAGGCGCTTAACCAGCCGTTTGCCCTGTCGCTGAATCTGGCGAGTGCCTTACCGGGTATCGACTTTGGCACCG
TGCTCGACCAGCCGTGTGAGCTGCTGGTGTGGTACGAAGGTATACTCCAAAGACGAGTGAGCGGGATTATCAGCGCCTTT
GCACAGGGCGACACCGGTTTTCGCCGTACCCGCTATCAGGCGGAAGTCCGTCCGGCCTTGTGGCGGCTGGGGCTGCGCAC
CAACGCCCGCCTCTTTCAGGCACAAAAGCCAGAGGCGATTATCGGTACGTTGCTGGAAGAGTCTGGCATTACCGATTATG
CCTTTGCCCTGCGTCACGACCACGCTCAACGTGAATACTGCGTACAGTATCGTGAAAGTGATTTAGCCTTTATTACTCGT
CTGGCAGCGGAAGAAGGGCTGTACTTCTTCCATGAGTTTGAAGAAGGCAAGCACCGCGTCGTCTTTGCGGATGATGCAGG
CGCATTGGTAAAAGGTCCTGAGCTATTTTTCAACCTGGCGACACAGGGGCTGAGCGAAGGCGAATATGTCCGCCGTTTCC
GCTACGCCGAAGCGGTCAGCACCGCCGAAGTCGCCCTCAAGGACTACAGCTTTAAAACCCCGGCCTACGGCCTGCTGCAC
AGCAAGATAAGCGGTGAACTGGCACATCAGCGCGAAAGCTATCAGCACTATGATTACCCTGGACGATTCAAACAAGACCC
GAGCGGCAAGGCCTTTACCAGCTACCGGCTGGATGCGTTACGCGCCAATGCGATGACCGGTTCGGGTGAATCCAATGCCG
CCATGCTGATGCCCGGCAGCAGTTTTACCTTAACCGAACATCCTAATCCGACGCTGAATAGTGGCTGGCAACTGGTTGCC
ATCACGCACAGCGGGCAGCAGCCGCAGGCGCTGGAAGAGGAAAGCGGCGGTGAACCGACCACCTACAGCAACAGCTTTGA
GGTTATCAGCGCCAAGTCTACCTGGCGTGCCGATTTACCGTACAAACCGATGGTCGATGGTCCGCAAATTGCCACCGTTG
TCGGCCCGGCGGGTGAGGAAATCTACTGTGACGAATATGGCCGCATCAAACTGCAATTCCCGTGGGACCGCTACGGCTCC
AGCGACGACCAGAGCTCCTGCTGGGTACGCGTCAGTCAGGGCTGGGCGGGCGGCCAATATGGCCTGATAGCCATCCCACG
CATCGGCCATGAAGTGATTGTCAGCTTCCTCGAAGGCGACCCGGACCAGCCGATTGTGACAGGCAGAACTTTCCACGCCA
CCAATCCGTCGCCGTATCCACTGCCAGCGAACAAGACACGCACCTCGCTGCGTACGTCAACGCACAAGGGGGCGGGTTTC
AATGAGCTGCGTTTTGAAGACCAGGCTGGGCAGGAAGAGGTGTTTATCCATGCCCAGAAAGACATGAACACCGTGGTGTT
GAATAACCGCACGACCAGCGTGACCGCTGACCACACCGAAAGCGTCGGTGGCAATCAGGCGGTATCGGTCGTGAAAGACC
AGTCCACTGAAATCCAGGGGCAGCAGAGCATCGCCGTGACCAAAAACCGCAACACGGTCGTGGATGACAACGACAGCCTT
CAGGTGAAAAACAACATCGCTATCCAGTCGCAGAAGGGGGACATCCTGATAGCCACGGACAAGGGGTTTATTGGTATCGG
TGCGGACGGGGTCATCAATATCAAGGGTACCCACATTGTCATCAACGGCCAGCAAATCGACCTGAACTGA

Protein sequence :
MANSTGLQFTVKVGALPESTFAVVDFQLSEALNQPFALSLNLASALPGIDFGTVLDQPCELLVWYEGILQRRVSGIISAF
AQGDTGFRRTRYQAEVRPALWRLGLRTNARLFQAQKPEAIIGTLLEESGITDYAFALRHDHAQREYCVQYRESDLAFITR
LAAEEGLYFFHEFEEGKHRVVFADDAGALVKGPELFFNLATQGLSEGEYVRRFRYAEAVSTAEVALKDYSFKTPAYGLLH
SKISGELAHQRESYQHYDYPGRFKQDPSGKAFTSYRLDALRANAMTGSGESNAAMLMPGSSFTLTEHPNPTLNSGWQLVA
ITHSGQQPQALEEESGGEPTTYSNSFEVISAKSTWRADLPYKPMVDGPQIATVVGPAGEEIYCDEYGRIKLQFPWDRYGS
SDDQSSCWVRVSQGWAGGQYGLIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTSTHKGAGF
NELRFEDQAGQEEVFIHAQKDMNTVVLNNRTTSVTADHTESVGGNQAVSVVKDQSTEIQGQQSIAVTKNRNTVVDDNDSL
QVKNNIAIQSQKGDILIATDKGFIGIGADGVINIKGTHIVINGQQIDLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 2e-163 54
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-131 44
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 4e-131 44