Gene Information

Name : W5S_3506 (W5S_3506)
Accession : YP_006284448.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Integrating conjugative element protein, PFL4703 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3776061 - 3776720 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence :
ATGAGCCGCTTTCGTAACGCTGTCAGTGCTCGCGATAATCATATTTTTACCTTGCGAGCTATCGTTGTTGGCCTGTTTTT
GTTGCTGATTTTCACTGCTTCAGGCTGGATGATGGCACCCAGTAAATTGACAATCCACAATCCTCCAGACCTGCGTTCTG
GGAGCACGCGCGAGTGGTGGCGAGTTCCTCCCTCAACGGTATACAGTTTTGCCTTCTATATTTTTCAGCAACTCAATGCC
TGGCCAAAAAACGGTGAAGTGGATTATCCCGCGAAAATCGCGCAGCTAAGTCCTTATCTGACACCCGTATGTCAGGACTT
CCTGAACAAAGATGCGCGGTTTCGCACTGACAATAGCGAGCTGCGTGACCGCGTTCGTGTTGTATATGAGATCCCTAAAC
GCGGTTATAGCAGTAAAAGCGTCGATGTTTTGTCTGATGATGAATGGGTTGCCCGCCTGGATTTGGTTGCTGACGAGTAT
TACCACACCGAACCTGTAAAACGGGCAATGGTGCGTTATCCATTGCGGGTCATCCGTTGGGAAGGTGATCCTGAACGTAA
CCAATTTGGGTTGGCTCTCGATTGCTATGCCAGCACGCCTCAACGACTGGAAGCGATGCCGGTTATTGCTCCTGAGAAAA
AATCGGGGGTATTCCAGTGA

Protein sequence :
MSRFRNAVSARDNHIFTLRAIVVGLFLLLIFTASGWMMAPSKLTIHNPPDLRSGSTREWWRVPPSTVYSFAFYIFQQLNA
WPKNGEVDYPAKIAQLSPYLTPVCQDFLNKDARFRTDNSELRDRVRVVYEIPKRGYSSKSVDVLSDDEWVARLDLVADEY
YHTEPVKRAMVRYPLRVIRWEGDPERNQFGLALDCYASTPQRLEAMPVIAPEKKSGVFQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api35 CAF28509.1 putative exported protein Not tested YAPI Protein 1e-80 76
YpsIP31758_3709 YP_001402663.1 hypothetical protein Not tested YAPI Protein 4e-80 76
YE3486 YP_001007645.1 hypothetical protein Not tested YAPI Protein 2e-79 74
t4265 NP_807863.1 hypothetical protein Not tested SPI-7 Protein 1e-71 74
STY4568 NP_458653.1 possible exported protein Not tested SPI-7 Protein 1e-71 74
PMI2581 YP_002152300.1 hypothetical protein Not tested Not named Protein 3e-68 67
ORF SG61 AAN62283.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-55 56
ORF C51 AAN62145.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-56 54
pph80 CAI36121.1 hypothetical protein Not tested PPHGI-1 Protein 4e-51 49
unnamed ABR13366.1 hypothetical protein Not tested PAGI-5 Protein 5e-45 47
RL026 AAP84153.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-45 47
EXA37 ABD94646.1 conserved hypothetical protein Not tested ExoU island A Protein 2e-45 47
Pmu_03110 YP_005176210.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 1e-42 44