Gene Information

Name : W5S_3505 (W5S_3505)
Accession : YP_006284447.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Integrating conjugative element protein, PFL4704 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3775168 - 3776064 bp
Length : 897 bp
Strand : -
Note : -

DNA sequence :
GTGAAGTTGAAAGCCTTATTGGTGATATGCGCCTCTCTCTTGTCATTGCCTGCCAGCGCACTGGAGCTCATGAAGTGGGA
ACGTATCCCGCTCCAAATTCCTCTGAATGTAGGGCAAGAACGTATTGTTTTTGTCGACAAAAACGTACGCGTTGGATTCC
CCCCGTCACTGAGCGGAAAACTGAGGATCCAGAGTAGCGGCGGGTCGGTTTACCTCAGTGCCAGTGAGCCTTTTCCTTCC
ACACGCCTGCAACTGCAGGATGTTGAGAATGGTGAGGTGATCCTCCTGGATATTAGCGCCGTGGAAGGGAAGAGCGTTCG
TGAACCTGTGCAGGTCGTTTATACCGGAGAGGTCTCTTCTGTCTCCACCAATGATAATGCAAAGGTTAGCGGCAACAGTA
ACAAAGCAAGTCATTCATCTTCCCCCCGTGAGTCAGTAGATAAGGCTGAACGGCATTCTCCCGTTTCTTCTGTCCCCATC
CCTGTCTTGTTGACGCGCTATGCAGCACAAAGTTTGTATGCGCCATTGCGCACCGTTGAGCCTGTCCCTGGGATTGGGGC
GGTATCCCTTAAGCTACCTAGCCCGATAACAACATTATTTCCTTCTGAGCCGGTCGTGGCTGTGCCATTGGCGGGATGGC
GACTGAACAATTTTAGTGTTATCGCATTGCAAATACGCAATACCTCATCCGGTAAGGTGATCCTGGATCCTCGCAGGCTA
CAGGGGAAATTTGTCAGCGCGACGTTTCAGCACCGTTGGCTGGGGAATGCCGGAACGCCGGAGGATACGACCGTCGCCTA
TCTGGTCATTGATGGTCAACCGGAAAGCGCATTTCTGCCAGAACCTGTGCTACCTGCCAAACCGGTTAAATCAACATCCA
GGGGCGTGACAAAATGA

Protein sequence :
MKLKALLVICASLLSLPASALELMKWERIPLQIPLNVGQERIVFVDKNVRVGFPPSLSGKLRIQSSGGSVYLSASEPFPS
TRLQLQDVENGEVILLDISAVEGKSVREPVQVVYTGEVSSVSTNDNAKVSGNSNKASHSSSPRESVDKAERHSPVSSVPI
PVLLTRYAAQSLYAPLRTVEPVPGIGAVSLKLPSPITTLFPSEPVVAVPLAGWRLNNFSVIALQIRNTSSGKVILDPRRL
QGKFVSATFQHRWLGNAGTPEDTTVAYLVIDGQPESAFLPEPVLPAKPVKSTSRGVTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api36 CAF28510.1 hypothetical protein Not tested YAPI Protein 2e-83 66
YE3485 YP_001007644.1 hypothetical protein Not tested YAPI Protein 4e-82 65
YpsIP31758_3708 YP_001402662.1 hypothetical protein Not tested YAPI Protein 2e-82 65
t4266 NP_807864.1 hypothetical protein Not tested SPI-7 Protein 3e-76 65
STY4569 NP_458654.1 hypothetical protein Not tested SPI-7 Protein 3e-76 65
PMI2580 YP_002152299.1 hypothetical protein Not tested Not named Protein 1e-73 60
ORF C50 AAN62144.1 hypothetical protein Not tested PAGI-2(C) Protein 6e-52 49
pph81 CAI36122.1 hypothetical protein Not tested PPHGI-1 Protein 3e-54 49
unnamed ABR13365.1 hypothetical protein Not tested PAGI-5 Protein 5e-56 48
ORF SG60 AAN62282.1 hypothetical protein Not tested PAGI-3(SG) Protein 9e-47 48
RL025 AAP84152.1 conserved hypothetical protein Not tested PAPI-1 Protein 9e-56 47
EXA36 ABD94645.1 conserved hypothetical protein Not tested ExoU island A Protein 7e-56 47
Pmu_03100 YP_005176209.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 6e-56 46