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Name : W5S_3500 (W5S_3500) Accession : YP_006284442.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Unknown Product : Type IV secretory protein VirB4 component Function : - COG functional category : - COG ID : - EC number : - Position : 3769148 - 3771973 bp Length : 2826 bp Strand : - Note : - DNA sequence : ATGTTTTCACTGTTTCGGCGTAAAACGACATCTGCAGATGAAAATCTGAAAGGAAATGGGCCATTCGCGATAGCGGGCCA TGAACCGCTTAGCCGTGATGGACGATTAACGGAAAAGGATGAGCAACAGCTTTATGGCGTTGCGCCGTCCATTATTGATT ATATGCCCTGGGCGGAATACCTCTCTGCGGATCAATGCTTATTGTTGGACGATGGTGTGTCTGTTGGTGCGGTTTATGAA ATTACGCCAGTGGGTACGGAAGGACGGCCGGCAGAGCGATTGGAAGAAATCCGCGATGTGGTTGAAGATGCTTTGCAGGA TAGTTTGACCGAGCTGGATAGTCACCAGTGGGTTGTCCAGTTTTACTGTCAGGATGATACAGATGTGACGGCGTATATGG ATACGCTACGTGGCTATGTCAAACCCTGGGCGGAGGGGACGGCATTCACACAGGCCTGGCTGGCTGAAACCGATCGCCAT ATGAAAAGTATTTCGGCAGAGAAAGGCCTGTTTGACGATAAAATTGTCACGGGTGCACCCTGGCGCGGACAAACCCGCCG TACACGTATGGTGATTTATCGTTATGTTGAAAAACAATCCCGCGATCCGTTACCGCCGGCGACCATGCTGAATCAGGTCT GCGACCGTTTAACCTCTGCATTATCCGGCGCCGGTATTCGCTGCCATCGGCAAAATGGCGAACAGATACATAACTGGCTA TTACGCTGGTTTAATCCCAAGCCGGAATGGGTTGCATCCGAGCTGCTGTATCACATGGCGTCACATGATGACGGTGCACC TGATTCTCTTCCCATATTGAACGATTTTAGCGAAACATTGTGGTTTACGCGGCCGCGTAGCGATGCCGAACGTGGGGTAT GGTGGTTTGATAATGTGGCGCACAAAGCGGTTCCGGTCGAACGGCTGAGAAAAGCGCCGCAGACGGGGCACCTGACCGGT GAAGTCAGACGTGGAGAGAACATCAATACGCTGATGGATCTGATGCCGCAGGGTACGGTGATTGCGATGACGTTGGTCGT TCAACCTCAGGATGTTCTGGAGGAGGAGTTCGCCAGTCTGGGCAAAAATGCAATGGGCGAAAATGTTGAATCTCAGCGTG TACGCGCAGATGCGGCAACAGCCAAAGAGTATCTGGGCGAGCGGCACAAACTGTATCGCTCATCGTTGACGTTTCTGATC AAAGCGTCAGATCTGGATACGCTCGACAAACGCTATCTTGATATCAGTGCCAAGCTGCTCAACGCTGGCCTTCAGCCGAT CAACCCTGAACATGATGTTGCGCCACTCAATGGCTACCTGCGTGCATTACCGATGTGTTTCAACCCCGAAACGGATAAAA ACCACTGGTATACCCGCCTGACGTTTGTACAGCATTTTGCCTGCCTGCTGCCGGTTTTTGGTCGTGATACGGGAACGGGT AATCCCGGCCTTTCCTTCTTCAATCGAGGGGGGGCGGCATTGTCATTCGATCCAATGAATAAGGCAGACAGGACACAGAA TGCCCATTTACTGTTGTTTGGACCGACAGGTTCAGGTAAGTCAGCGACATTGTGTAGTGTTTTAGCACAGGTGATGGCTA TCCACCGTTCACGGCTGTTTTTACTGGAGGCGGGAAACTCGTTTGGGTTGCTTGGTGATTATTATGAGTCATTAGGGCTG ACGGTGAACAAGATCAGCATCAAGCCTGGGCGTGGTGTCTCACTGGCGCCGTTTGCCGATGCTCACCAGTTGTTACAGGT AGATCCCAGGGAACTCATTACTGATGAACTGTCTTTGCCTGAGCTGGATGATGATGCAAAAGAGCCGGATGATGACGATG AGGAAAAGCGCGATATTCTGGGAGAAATGGAGATCGCGGCACGCCTGATGGTCACCGGTGGTGAGGCAGCAGAAGAAGCA AGGATGACTCGTGCCGATCGTGGCATGTTGCGTGAAGCTATTCTGGCGGCGGCGAAGCAGTCGTATGAAGCCGAACATCA GATGTTACCCTCAGATTTGATGTCGGCGTTAGAGCATATTGCCCGGGATAATACCAAGGACAGTGAAGGACGAGACCGCA GAACGGCAGCAAGACGTGCACGTGCTGAGGAGATGGCTGAGGCGTTACGTATGTTCACCGAAGGGTTTGAGGGGGAACTG TTTAACCGCCCGGGAACACCCTGGCCAGAAGCGGATGTTACGATCATCGATCTCGGTACATTGGCGCGTGAGGGCTATGA AGCACAGATGGCCGTCGCTGTTATCGCACTGGTGAATACCGTCAATAACATCGCTGAGCGTGATCAGTACCTGGATCGTG AAATCAATATGGTTATCGATGAAGCCCATATTGCGACGACGAACCCCCTGTTATCACCGTATATGACTAAGGTGGTGAAA ATGTGGCGTAAATTGGGGGCGTGGCTCTGGCTGGCCACGCAGAACCTAGCGGATTATCCGGATACGTCGGAAAAAATGCT CAATATGGCAGAATGGTGGTTGTGTCTGACCATGCCACCGGATGAAGTGGAGCAAATCTCGCGGTTCAAAAAGCTGAATG AAGAGCAAAAGGCGATGTTGCTCTCTGCGACAAAGTTACCCCGATGCTATACGGAAGGTGTGGTTCTGGCTAAACGGGTA GAAGCTCTATTCAGAGCCGTTCCTCCCAGCCTTTACCTTGCGTTGGGAATGACTGAAAAAGAAGAAAAAGCGGAGCGCCG GCAACTGATGAATGAACATGGCTGCAGTGAGCTGGAAGCGGCTTTTCTAGTGGCGAAGAAGCTGGATAAGGCAAGAGGGA TTATGACTGAAGCGGAGGCGGCGTGA Protein sequence : MFSLFRRKTTSADENLKGNGPFAIAGHEPLSRDGRLTEKDEQQLYGVAPSIIDYMPWAEYLSADQCLLLDDGVSVGAVYE ITPVGTEGRPAERLEEIRDVVEDALQDSLTELDSHQWVVQFYCQDDTDVTAYMDTLRGYVKPWAEGTAFTQAWLAETDRH MKSISAEKGLFDDKIVTGAPWRGQTRRTRMVIYRYVEKQSRDPLPPATMLNQVCDRLTSALSGAGIRCHRQNGEQIHNWL LRWFNPKPEWVASELLYHMASHDDGAPDSLPILNDFSETLWFTRPRSDAERGVWWFDNVAHKAVPVERLRKAPQTGHLTG EVRRGENINTLMDLMPQGTVIAMTLVVQPQDVLEEEFASLGKNAMGENVESQRVRADAATAKEYLGERHKLYRSSLTFLI KASDLDTLDKRYLDISAKLLNAGLQPINPEHDVAPLNGYLRALPMCFNPETDKNHWYTRLTFVQHFACLLPVFGRDTGTG NPGLSFFNRGGAALSFDPMNKADRTQNAHLLLFGPTGSGKSATLCSVLAQVMAIHRSRLFLLEAGNSFGLLGDYYESLGL TVNKISIKPGRGVSLAPFADAHQLLQVDPRELITDELSLPELDDDAKEPDDDDEEKRDILGEMEIAARLMVTGGEAAEEA RMTRADRGMLREAILAAAKQSYEAEHQMLPSDLMSALEHIARDNTKDSEGRDRRTAARRARAEEMAEALRMFTEGFEGEL FNRPGTPWPEADVTIIDLGTLAREGYEAQMAVAVIALVNTVNNIAERDQYLDREINMVIDEAHIATTNPLLSPYMTKVVK MWRKLGAWLWLATQNLADYPDTSEKMLNMAEWWLCLTMPPDEVEQISRFKKLNEEQKAMLLSATKLPRCYTEGVVLAKRV EALFRAVPPSLYLALGMTEKEEKAERRQLMNEHGCSELEAAFLVAKKLDKARGIMTEAEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| YE3482 | YP_001007641.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 84 |
| api39 | CAF28513.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 83 |
| YpsIP31758_3705 | YP_001402659.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 83 |
| STY4573 | NP_458658.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 67 |
| PMI2576 | YP_002152295.1 | hypothetical protein | Not tested | Not named | Protein | 0.0 | 65 |
| ORF SG57 | AAN62279.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 52 |
| ORF C47 | AAN62141.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 52 |
| virB4 | CAI36125.1 | VirB4 component | Not tested | PPHGI-1 | Protein | 0.0 | 50 |
| unnamed | ABR13362.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 0.0 | 49 |
| Pmu_03070 | YP_005176206.1 | conjugative transfer ATPase TraC-like, PFL family | Not tested | ICEPmu1 | Protein | 0.0 | 49 |
| RL022 | AAP84149.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 0.0 | 49 |
| EXA33 | ABD94642.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 0.0 | 48 |
