Gene Information

Name : W5S_3486 (W5S_3486)
Accession : YP_006284428.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Integrating conjugative element protein, PFL4710 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3757266 - 3758234 bp
Length : 969 bp
Strand : -
Note : -

DNA sequence :
GTGAAATTTGCTACTCCTCGTAGTCGGCGATTGCTTCTGGCTGTCTTACTCACTGGCAGCGGCTTGTGTACGGCCAGTGT
CAATACCGCCAGTTTGATGGCCAGTGCAACATCTGTGTCCTGTATTAGCTGGCGTGTAAAAGGGATCTGTTACTGGCTCC
TTTGTACCCCATTTGGTTGCTCTATTAAAACATCGGTAAAAGTGGAGCACTTTATCCCTGAAGCGGTGGTTTCTGCCTAC
GCCAATGAGGGTGAAAATCCCTGGGTGGAAATGGCGACAGTGAGTCAGGCCGCAGGGAGTGGTGAAAGTGCGCTTGTTGG
CTCACTATCCGGTGTTGCGACTGGCGGCGGAAATCAGGAGCTGAAAGCGCCAGGGTTACGCAAGAAAAATATCCATTTCT
ATTATGCGGATGCGTATGGCCATCCTGCGACCTCAGCGATCGGCGGTATGGTGCCGGGCTATTCATGCCAGACAGCCGCT
ACGCCGTTTGTGCCTTACTTTATGAGCTCACTCGATGCGCTGGTTTGGCGCAGCGGTATTCCTGAATCGCTTTATCCTGA
AGCATTGATCCCCGGGCAGCGCGAATTGGGTAGCCAGGCATCAGCAAATATGTGGGGGAATGTTTACCCACGTAGCGGCT
TTGTGACGCAGCACGATGGGTATAAATCGGCTGCTTTAGTCGCACAACGCGTTGCTGATGTCATTACGCGCAGTGGGCAG
CTTCATGTCTATCAACCCCTGGTTGGACAACGCTCACCAGGCTACTGGCCTCCTGACCCGGTTCGTGAAAATACTGGGAC
GCAAAATCATAAATGGCAGCGTTTATCCCCTCAGTTATCCAATTCATGTGCGGTTTTTCCTGACAACGGCGCCGTTGCAC
AGAATGGCCAGTATGCCTGGGCATTGTGGCAACCCTATAGCTGTTGCAAACGGCGTGGCCAGACTTTCCTTTACAGCACT
GATTTCTAA

Protein sequence :
MKFATPRSRRLLLAVLLTGSGLCTASVNTASLMASATSVSCISWRVKGICYWLLCTPFGCSIKTSVKVEHFIPEAVVSAY
ANEGENPWVEMATVSQAAGSGESALVGSLSGVATGGGNQELKAPGLRKKNIHFYYADAYGHPATSAIGGMVPGYSCQTAA
TPFVPYFMSSLDALVWRSGIPESLYPEALIPGQRELGSQASANMWGNVYPRSGFVTQHDGYKSAALVAQRVADVITRSGQ
LHVYQPLVGQRSPGYWPPDPVRENTGTQNHKWQRLSPQLSNSCAVFPDNGAVAQNGQYAWALWQPYSCCKRRGQTFLYST
DF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 3e-114 78
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 2e-113 77
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 9e-104 75
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 2e-93 73
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 9e-110 71
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 9e-110 71
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 6e-93 68
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 7e-78 53
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 9e-71 50
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 1e-71 49
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 2e-68 49
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 9e-69 49
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 4e-68 48
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 2e-63 47