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Name : W5S_3485 (W5S_3485) Accession : YP_006284427.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Unknown Product : Membrane protein, Tfp pilus assembly, pilus retraction ATPase PilT Function : - COG functional category : - COG ID : - EC number : - Position : 3755823 - 3757250 bp Length : 1428 bp Strand : - Note : - DNA sequence : ATGAAAACACAGCAAACGCGCTATTCCACGTCCGTCTCTATTTTATCCGGCATTCTGGCCATTACGATCCTCGGTACTGC ACCCCATGCGGAAGCTGAGGTTAATACGTCTCCTTCAGGAGCATCTGTCAGTGGTGCAGTCAGTGATGGATTGTTCTACT CGATTGGTGGCGGCACAGTGATCTCTCCTCCGTCATCACGGAACAGCATGACGCGTCTGGGCGTGACCGGCGGCTGGAGC AGCGACCTGATGTGCGGCAATTTCGATATGAAAACCACGGTCGGTAATCAGCTTAACGGTATTACCAGTGGTTTTAAGGA TCTGATGGGAACCGTGATCCAGGGTGCGACTGGTGCGGTGGCCAGTATGCCGGCGATGGTCATCCAGCGTGCTAATCCTG CGCTGTATGAAATGCTGACCAATGGTGTGTTGCAGGCCGGACTTAGCTTTGACAAGGCCAAGCTGAGTTGCCAGAGCATG GCCAACAAAATGGCCGATTATACCGTGGGTAATAAATGGACTCAGGCTGCAGTTGTGGAGGAATACAAGGATATTGTGGC ATCCAGTAACGGTGATGCAGTTAGCAGCGACCAGAAGTTGCAGAAAGCAACCGGGGAAGACGGGGCAACCTGGATTGGTG GCCAAAAACGCGGCGGAAAGGGACAGGCAGCTATCAGACCCACGCGGGATTTGGCGAAAGCTGGCTTCAATATGATGAAT AACCTGCCAGTGACGAGTAACAGCAGTGTCAGCTCATCAAGCTGCAACGGTACATCATGCCAACGTTTCCCTTCTTCTGA AAAAGCGGCTGAAGCGGTAGTCAAGGTACTTGGCGATCGCTCGATTCGTACCTGCCGGGATGCCAGTCAGTGTTCAAGTG GTGGCGTGGAGAACGAACCTGGGAGCAGTGTTGCCGGCACGGGATTCTCCCCAATGCTGGAAGAGGCAACAAAAGAAAAT ACGGAACAGTTGGTAAAACTGGTTGGCGGAGCTGAAGCGCCGACGGCAAGCAATTTGGCCAAGCTCAAAACAGGCAGCAT GGTTGTGACGCGTAGCGTTATCCAGTCCCTGAAAGATGATCCGGACAATAGCGCACTCATTCAGCGTTTAGCCGGTGAAC TGGCGATGTCGGATACCGTTGAAACCGCACTGACGATGCGTAGGATGCTGACGACGGGACAATCCGAACCGAATGCAGCC GATCAACCTGAAGCCCTGTCTGAAGGTGACCGGCGTATTGATGCACTGGACAGGGAGTTGGCTGCATTGAAAAACGAAAT GGATATCCGTAAAGCCATCAGTAATAACAGCTTGCTGACCACGCTGGAGCGTCAGGGAGTACGTAATCAAGGCAACCGGT TCCAGCAAAAGAGTGGGAGCCAGGATCAAGGCTTTAACGGATTGAGCCAGAATCAGGGAGGGCAGTAA Protein sequence : MKTQQTRYSTSVSILSGILAITILGTAPHAEAEVNTSPSGASVSGAVSDGLFYSIGGGTVISPPSSRNSMTRLGVTGGWS SDLMCGNFDMKTTVGNQLNGITSGFKDLMGTVIQGATGAVASMPAMVIQRANPALYEMLTNGVLQAGLSFDKAKLSCQSM ANKMADYTVGNKWTQAAVVEEYKDIVASSNGDAVSSDQKLQKATGEDGATWIGGQKRGGKGQAAIRPTRDLAKAGFNMMN NLPVTSNSSVSSSSCNGTSCQRFPSSEKAAEAVVKVLGDRSIRTCRDASQCSSGGVENEPGSSVAGTGFSPMLEEATKEN TEQLVKLVGGAEAPTASNLAKLKTGSMVVTRSVIQSLKDDPDNSALIQRLAGELAMSDTVETALTMRRMLTTGQSEPNAA DQPEALSEGDRRIDALDRELAALKNEMDIRKAISNNSLLTTLERQGVRNQGNRFQQKSGSQDQGFNGLSQNQGGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| api55 | CAF28529.1 | putative exported protein | Not tested | YAPI | Protein | 6e-151 | 82 |
| YpsIP31758_3700 | YP_001402654.1 | hypothetical protein | Not tested | YAPI | Protein | 6e-150 | 82 |
| YE3466 | YP_001007627.1 | hypothetical protein | Not tested | YAPI | Protein | 1e-150 | 82 |
| unnamed | AAX39459.1 | unknown | Not tested | Hrp PAI | Protein | 3e-150 | 75 |
| STY4577 | NP_458662.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-130 | 63 |
| t4274 | NP_807872.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-130 | 63 |
| PMI2572 | YP_002152291.1 | hypothetical protein | Not tested | Not named | Protein | 3e-115 | 58 |
| ORF C42 | AAN62135.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 4e-67 | 43 |
| ORF SG50 | AAN62272.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 5e-63 | 41 |
