Gene Information

Name : W5S_3479 (W5S_3479)
Accession : YP_006284421.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Resistance
Product : Antisigma-factor antagonist, STAS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3750205 - 3751683 bp
Length : 1479 bp
Strand : -
Note : -

DNA sequence :
ATGTTGCTGTCCTCGACGCGTAAGGACTGGCTGGGTAACGTCCGTGGTGACGTGCTGGCTGGTATTGTTGTCGCGCTCGC
ACTCATTCCAGAAGCGATCGCCTTTTCCATTATTGCCGGTGTTGACCCTCAGGTTGGGCTTTACTCCGCCTTCTGTATCC
CGCTGGTTATGGCCTTCTTTGGTGGTCGCCCGGCGATGATATCTTCATCAACGGGGGCAATGGCGCTCCTGATGGTGACC
CTGGTGAAGGATCATGGACTGCAGTACTTACTGGCTGCTTCCGTACTGACCGGAGTATTCCAGTTGATAGCCGGCTATCT
GAAACTTGGTGGGCTAATGCGCTTCGTCTCACGCTCAGTGGTCACCGGATTCGTTAATGCACTCGCGATCCTGATTTTCA
TGGCGCAGTTACCTGAGCTCACCAATGTGACCTGGCATGTTTATGCCATGACAGCAGGGGGGCTCGCCATTATTTACCTC
TTCCCGTATCTGAATAAAACAATCCCCTCACCCCTTGTCTGTATCGTGGTGCTGACGGCGATTGCCATGTGGTTACATCT
GGACGTTCGTACTGTCGGGGATATGGGCAAACTGCCTGACAGTCTGCCGGTCTTCCTGGTGCCGGATATCCCGCTGAATC
TTGATACGCTCCTGATCATTCTCCCGTACTCCGCAGGGCTCGCCGTTGTAGGGCTACTGGAATCCATGATGACAGCCACG
ATTGTGGATGATATGACGGATACCCCCAGTGATAAAAACAGGGAATGCAAGGCACAGGGCATCGCCAATATCTGCACCTC
CTTTATCGGGGGGATGGCGGGCTGTGCAATGATTGGTCAGTCCGTTATCAACGTCAAATCCGGCGGCCGGGGCCGTCTGT
CCACCCTCACTGCCGGTGTGGTCCTGCTGTGTATGGTGGTCTTCCTCAGGGACCTGGTCTCGCAAATCCCTATGGCCGCC
CTGGTCGCCGTGATGATCATGGTTTCGATTGGTACCTTTTCATGGCGTTCAGTTGTGGATCTTAAAAGCCATCCGATTTC
TACCAGCGTGGTGATGCTGGCAACGGTCGTGGTGGTGGTGGCCTCTCATAATCTGGCATTCGGGGTACTCACCGGTGTGC
TGATCGCTTCCCTGAATTTTGCCACTAAAGTGGCACGTTTTCTGGCTGTCTCTTCAGAACTCAGGGAAGAAACCCGGAGC
TACAAGGTCACCGGGCAGGTGTTCTTTGCCTCCGCCGACCGCTTTATGGCGTATTTTGATTTTCGCGAAGCCGTAGAGAA
AGTTGTCATTGATGTTACGCATGCTCATTTCTGGGATATCACGTCGGTCAGCGCACTGGATAAGGTGGTTATTAAATTCC
GCAGAGAAGGAACAGACGTTGAGATCCGAGGGATGAACGAAGCAACCCGTACAATCGTTGATCGTTTTGGTGTTCACGAT
AAACCCGAAGAAGTCGAAAAACTGATGGGAGGTCATTAA

Protein sequence :
MLLSSTRKDWLGNVRGDVLAGIVVALALIPEAIAFSIIAGVDPQVGLYSAFCIPLVMAFFGGRPAMISSSTGAMALLMVT
LVKDHGLQYLLAASVLTGVFQLIAGYLKLGGLMRFVSRSVVTGFVNALAILIFMAQLPELTNVTWHVYAMTAGGLAIIYL
FPYLNKTIPSPLVCIVVLTAIAMWLHLDVRTVGDMGKLPDSLPVFLVPDIPLNLDTLLIILPYSAGLAVVGLLESMMTAT
IVDDMTDTPSDKNRECKAQGIANICTSFIGGMAGCAMIGQSVINVKSGGRGRLSTLTAGVVLLCMVVFLRDLVSQIPMAA
LVAVMIMVSIGTFSWRSVVDLKSHPISTSVVMLATVVVVVASHNLAFGVLTGVLIASLNFATKVARFLAVSSELREETRS
YKVTGQVFFASADRFMAYFDFREAVEKVVIDVTHAHFWDITSVSALDKVVIKFRREGTDVEIRGMNEATRTIVDRFGVHD
KPEEVEKLMGGH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 2e-167 73
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 1e-167 73
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 8e-163 72
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 3e-171 72
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 2e-171 72
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 3e-171 72
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 1e-162 72
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 2e-171 72
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 3e-171 72
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 1e-162 72
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 2e-171 72
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 3e-171 72
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 3e-171 72
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 3e-171 72
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 3e-171 72
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 3e-171 72
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 3e-171 72
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 8e-163 72
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 3e-171 72