|
Name : W5S_3450 (W5S_3450) Accession : YP_006284392.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Unknown Product : IS407A, transposase OrfB Function : - COG functional category : - COG ID : - EC number : - Position : 3728408 - 3729178 bp Length : 771 bp Strand : - Note : - DNA sequence : ATGTTATCGCTGAGCAGGACGGTCTATTTTTATCAGCCCGACACACGGCGTGATGAACCGGTGATTCAGGCACTAACTGA CATGGCGGAGCGCTATCCGCGATATGGATTTAAAAAGCTTTTTCAGGTACTTCGCAGGCAGGGCAATATCTGGAACCATA AAAGAGTTCACCGGATTTACTGTCTGCTGAAACTGAATTTTCGCCGTAAGGGAAAGCAGCGCCTGCCGGTGCGTAATCCG GCCCCGCTGGCGACGCCGGAGGCACTTAATCAGAGCTGGTCGATAGATTTTATGCATGATGCACTGGTCTGTGGCAGACG CTTTCGGACCTTTAATGTGGTGGATGACTTTAACCGCGAGGCTCTCGCAGTAGAAATCGATTTAAATATCCCGGCGCAGC GGGTGGTCAGGGTGCTGGACAGGATCGTGGTAAACCGTGGTTATCCGTTGAAACTAAGAATGGACAATGGCCCGGAGCTG ATCTCGCTGACATTGGCACAGTGGGCTGAAGAGCATGGCGTGATGCTGGAATTTATCAAACCGGGAAAACCAACGCAGAA TGCCTTTATCGAACGTTTTAACCGAACGTACCGAACAGAGATACTGGATTTTTACCTGTTCAGAACGCTGAATGAAGTCA GGGAAATTACGGAGCGCTGGCTGCATGAATATAATAGCGAGCGTCCCCATGAATCACTGAATAACCTGACGCCGGAAGAA TACCGGCTGATGGCTAAAGATCCGGAAATCTCAAAAAGTGTGTGGAACTAA Protein sequence : MLSLSRTVYFYQPDTRRDEPVIQALTDMAERYPRYGFKKLFQVLRRQGNIWNHKRVHRIYCLLKLNFRRKGKQRLPVRNP APLATPEALNQSWSIDFMHDALVCGRRFRTFNVVDDFNREALAVEIDLNIPAQRVVRVLDRIVVNRGYPLKLRMDNGPEL ISLTLAQWAEEHGVMLEFIKPGKPTQNAFIERFNRTYRTEILDFYLFRTLNEVREITERWLHEYNSERPHESLNNLTPEE YRLMAKDPEISKSVWN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 1e-110 | 92 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 3e-34 | 43 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 2e-41 | 41 |
