Gene Information

Name : W5S_3445 (W5S_3445)
Accession : YP_006284387.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Putative DNA-binding prophage protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3723680 - 3724567 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :
ATGGCCAAATTAAATAAAAGTCTAGTAACTCTGGCTCGGCATGGTGGCGGGAGTTTTAAGACCGTTCATGATCGTATGAA
AATTGCAGATCGCGTTGCCGACAGGTTGATAAGCCTGAATATTCAAATTCGTGACGCTAAAAATATCAAACCAAAACACG
TCGAGATGTATATCAAAAGTCGACGTCTTGAAAATATATCCATACGGACTCTGCAAAATGAGATGTCTGCGATACGCTGT
ATCTTACGTGCGTGTGGTAAAACGATTATGGCTAACCCTGAACATGAAACATTAAATAACCGGTCATTAGGTATTTCTGG
GGCCAGCAGAGAAGGGACGAAAGTTGCCATTCCTGATAGCGTATACGAAAGTGCCTTGGAAAAAGTTAAAGTTGTCGATC
AAGGTGCAGCTGCTGCGATGGAACTATCACGACTTCTTGGTTTACGTAATGAAGAGACCATTCAATCTGTTAAATCACTT
AAAACATGGCAGAAGGCGTTACAAAATGGTGATGAAAAAGTTCGAATTGTTTTTGGAACGAAAGGGGGGCGCCCTAGAGA
TACCACTATTATTGATAGGGATAAATTGTTAATCGCAGTGAACAACGCAATCAGCATATCTGATAAAAATCATAACCGTT
TGATTGATAGCCCTGCTTTACATTTGGCCATTGAAAAATATCGTAATATTGTAAGGGGCTCTGGGCTTGTTGGTAAATAC
GCACCTCATAGCCTTCGATATGCGTATACTACCGATGTTACCAATCTTCATATTAAAAATGGCTTTAGCCAAAAGGAGGC
TGAAGCATTAGCTTCTATGGATTTGGGTCATGGAGATGGTAGGGGACATTATGTTGCTCGCGTTTATAACAAAGTTGACC
AAGAATAA

Protein sequence :
MAKLNKSLVTLARHGGGSFKTVHDRMKIADRVADRLISLNIQIRDAKNIKPKHVEMYIKSRRLENISIRTLQNEMSAIRC
ILRACGKTIMANPEHETLNNRSLGISGASREGTKVAIPDSVYESALEKVKVVDQGAAAAMELSRLLGLRNEETIQSVKSL
KTWQKALQNGDEKVRIVFGTKGGRPRDTTIIDRDKLLIAVNNAISISDKNHNRLIDSPALHLAIEKYRNIVRGSGLVGKY
APHSLRYAYTTDVTNLHIKNGFSQKEAEALASMDLGHGDGRGHYVARVYNKVDQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YE3461 YP_001007623.1 putative phage integrase Not tested YAPI Protein 2e-100 72
YpsIP31758_3697 YP_001402651.1 hypothetical protein Not tested YAPI Protein 3e-104 71
api85 CAF28559.1 putative integrase Not tested YAPI Protein 4e-77 71
PMI2564 YP_002152283.1 hypothetical protein Not tested Not named Protein 1e-76 54
SESS1296_03610 AFO66305.1 putative DNA binding protein Not tested SESS LEE Protein 2e-62 49
SESS1635_03828 AFO66378.1 putative DNA binding protein Not tested SESS LEE Protein 2e-62 49
STY4676 NP_458755.1 hypothetical protein Not tested SPI-7 Protein 1e-57 47
t4367 NP_807960.1 hypothetical protein Not tested SPI-7 Protein 1e-57 47
STY4586 NP_458670.1 hypothetical protein Not tested SPI-7 Protein 2e-57 44
t4280 NP_807878.1 hypothetical protein Not tested SPI-7 Protein 2e-57 44