Gene Information

Name : W5S_3422 (W5S_3422)
Accession : YP_006284364.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3703476 - 3704450 bp
Length : 975 bp
Strand : -
Note : -

DNA sequence :
ATGACTGTAACCTATGAAGATATCATTCAGGATTACTTTTTTAGTAAGCCTTTACGACCTGCAACCGAAATAAGCTACAG
AAAAGTCCTGAATCTTTTTTTACGATTCACGGGAGAGAAGATCCTGCCGGCTGATGTAGATCGTCATACGGTGCTCAGTT
GGCGGAGACATCTGTTGAATGAGCGCCAGCTCTCTACTATCACATGGAATAACCGGGTAGCTCATATGCGTGCCATTTTT
AATCACGCAATGAAATATGATTTTGTGAAAATGAAAGAGAATCCCTTTAACAGTGTGGTAGCCAGACCTGACGTTAAGCG
TAAAAAAACGCTATCAGAAGAACAGATCCGAAAAATCTATTTGGTGATGGAAGCCAGAGAAGAAAAAGAGTTTGAGGATT
GTGATTTCCGAAGTGCACTACGCCCAGCCTGGTTCTGGCTGACGGTCATCGATACGCTGCGCTATACGGGCATGAGGCAA
AACCAGTTGCTACACATTCGCCTGGAAGACGTTAATCTGGATGAGGGCTGGATCAATCTGCGGCCAGAGGCATCTAAAAA
CCATAAGGAACATATTGTTCCCATTACAACACTGCTCAGACCGCGTCTGGAGCGACTTTATCATGCCGCGCTTAATCAGG
ATGCGAACATGGGGGATCAGCTTTTCAACGTTCACCTGTTTAAAGGACGGAAAAGTAATGTATCCAAAAACATGGATCCT
CCACCAATGCGGGCTTTTTTTCGTCGACTGTCAGTGGAATGTCGTTGCACGATAAGCCCACACCGATTCAGGCATACGAT
CGCCACCGAGATGATGAAATCACCGGATCGCAATCTCAAAATTGTTCAGACGCTATTGGGACACTCTAATGTCAGCGTGA
CGCTGGAATATGTGGAAGGGAACATGGATATTGTCAGGAATGCACTGGAGCAGGAGTTTAGCAGGAAAAGTGTGCGCTTT
GCCGGCACAGTATGA

Protein sequence :
MTVTYEDIIQDYFFSKPLRPATEISYRKVLNLFLRFTGEKILPADVDRHTVLSWRRHLLNERQLSTITWNNRVAHMRAIF
NHAMKYDFVKMKENPFNSVVARPDVKRKKTLSEEQIRKIYLVMEAREEKEFEDCDFRSALRPAWFWLTVIDTLRYTGMRQ
NQLLHIRLEDVNLDEGWINLRPEASKNHKEHIVPITTLLRPRLERLYHAALNQDANMGDQLFNVHLFKGRKSNVSKNMDP
PPMRAFFRRLSVECRCTISPHRFRHTIATEMMKSPDRNLKIVQTLLGHSNVSVTLEYVEGNMDIVRNALEQEFSRKSVRF
AGTV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3686 YP_001402640.1 phage integrase Not tested YAPI Protein 7e-112 71
YE3450 YP_001007614.1 phage integrase Not tested YAPI Protein 2e-113 71
api95 CAF28569.1 putative phage integrase Not tested YAPI Protein 5e-112 71
STY4666 NP_458745.1 probable phage integrase Not tested SPI-7 Protein 3e-78 54
t4357 NP_807950.1 phage integrase Not tested SPI-7 Protein 3e-78 54