Gene Information

Name : W5S_3298 (W5S_3298)
Accession : YP_006284244.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Phosphate regulon transcriptional regulatory protein PhoB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3551518 - 3552207 bp
Length : 690 bp
Strand : -
Note : -

DNA sequence : 
ATGGCAAAACGCATATTAGTCGTGGAAGATGAAGCACCAATTCGTGAAATGGTTTGCTTTGTACTGGAACAAAATGGGTA
TCAACCAGTGGAAGCCGAAGATTATGACAGTGCGGTAACGCAATTGTCGGAACCGTTCCCAGAGCTGGTGTTATTGGACT
GGATGCTGCCAGGAGGATCGGGCCTGCAATTCATCAAGCATATGAAGCGCGAGGCGCTGACGCGTGATATTCCGGTAATG
ATGTTGACCGCGCGTGGCGAAGAAGAAGACCGCGTGCGCGGGCTTGAAGTGGGAGCGGATGATTACATTACCAAGCCGTT
TTCACCTAAGGAGCTGGTGGCGCGAATTAAAGCTGTGATGCGCCGAATTTCGCCGATGGCAGTGGAAGAAGTGATTGAAA
TGCGTGGTCTGAGTCTCGATCCTTCCTCTCATCGCGTGACAACTGAAGAGCACGCGCTGGATATGGGGCCGACGGAATTT
AAACTGCTGCATTTCTTTATGACACATCCTGAACGTGTTTATAGCCGGGAACAGTTGCTGAATCACGTGTGGGGCACTAA
CGTTTATGTTGAGGATCGTACTGTCGACGTCCATATTCGTCGCCTGCGTAAAGCGCTGGAAACCAGCGGACATGACAAAA
TGGTGCAAACCGTTCGGGGAACGGGCTACCGTTTTTCAACGCGTTACTGA

Protein sequence : 
MAKRILVVEDEAPIREMVCFVLEQNGYQPVEAEDYDSAVTQLSEPFPELVLLDWMLPGGSGLQFIKHMKREALTRDIPVM
MLTARGEEEDRVRGLEVGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMRGLSLDPSSHRVTTEEHALDMGPTEF
KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALETSGHDKMVQTVRGTGYRFSTRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 7e-35 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 8e-35 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_3298 YP_006284244.1 Phosphate regulon transcriptional regulatory protein PhoB HE999704.1.gene2815. Protein 2e-39 42
W5S_3298 YP_006284244.1 Phosphate regulon transcriptional regulatory protein PhoB NC_010410.6002989.p0 Protein 9e-35 41
W5S_3298 YP_006284244.1 Phosphate regulon transcriptional regulatory protein PhoB NC_011595.7057856.p0 Protein 9e-35 41
W5S_3298 YP_006284244.1 Phosphate regulon transcriptional regulatory protein PhoB NC_010400.5986590.p0 Protein 1e-36 41
W5S_3298 YP_006284244.1 Phosphate regulon transcriptional regulatory protein PhoB CP000647.1.gene2531. Protein 6e-36 41
W5S_3298 YP_006284244.1 Phosphate regulon transcriptional regulatory protein PhoB BAC0596 Protein 1e-34 41
W5S_3298 YP_006284244.1 Phosphate regulon transcriptional regulatory protein PhoB CP001138.1.gene2239. Protein 1e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_3298 YP_006284244.1 Phosphate regulon transcriptional regulatory protein PhoB VFG1563 Protein 4e-35 41
W5S_3298 YP_006284244.1 Phosphate regulon transcriptional regulatory protein PhoB VFG1702 Protein 3e-35 41