Gene Information

Name : W5S_3282 (W5S_3282)
Accession : YP_006284228.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Riboflavin biosynthesis protein RibD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3533078 - 3534244 bp
Length : 1167 bp
Strand : -
Note : -

DNA sequence :
ATGAGCGCTTTCCAGGAAAACAGTTCTCAGAAAAATAATGCTCAGGAAAACGGGCAATTGCCGCAGGATGCATTCTACAT
GGCGCGTGCGTTAGAACTGGCGCGTCGTGGCCGTTTTACGACGGCACCTAACCCCAATGTTGGCTGTGTGATCGTGCGTG
ATGGCGAGATTGTCGGTGAAGGCTACCATTTCCGTGCGGGTGAACCTCATGCAGAGGTGCATGCGCTGAGAATGGCGGGG
GAACGCGCACGTGGCGCGACGGCCTATGTCACTCTGGAACCGTGCAGCCACCACGGACGAACGCCGCCTTGTGCCGATGC
GCTGATTGCTGCTGGCGTTTCTCGTGTGGTGGCCGCAATGCAGGACCCCAATCCACAGGTTGCCGGTCGTGGTTTACATC
GCTTACAGCAATCAGGGATTACCGTTAGTCATGGCGTGATGATGGCTGAAGCAGAGAAGGTGAATGTCGGCTTTCTGAAA
CGTATGCGGACGGGCTTTCCTTACGTGCAGCTCAAAATGGCGGCGTCTTTGGATGGGCGTACTGCGATGGCATCGGGAGA
AAGCCAGTGGATTACTTCGCCGCAGGCGCGGCAGGATGTACAGCGTTTTCGCGCGGAGAGCGCCGCAATTCTGAGCAGCA
GTGCGACAGTATTGGCCGACGATCCCTCCCTCACCGTGCGGTGGTTAGAATTGGATGCGGATGTTCAGAAACGCTATTCA
GAGGCAGATCTCAGGCAGCCCGTTCGGGTGATTGTGGACAGTCAGCAGCGCGTCACGCCGCAACATCGCGTTGTTAGCCA
ACCGGGTGAAACCTGGTTAGCACGTGTTCAGGCCGATGAACAGGCATGGCCGCAGGGCGTTGAACAGGTCATGCTACCGC
AGCACAATGGCGGCGTTGATTTGGTGGCGCTAATGATGGTGCTGGGGAGGCGTCAGATTAACTCCGTCTGGGTTGAGGCC
GGAGCAAGTCTGGCCGGGGCGTTGCTTAATGCGGGTGTCGTTGATGAACTTATCGTTTATCTTGCCCCCAAACTGCTGGG
TGAAAATGCCCGTGCGCTGTGCCTCTTACCAGGGTTAGATCAACTGTCTCAGGCACCAGAATTTGACATCGCAGAGGTTC
GCCAGATTGGCCCGGATTTGCGATTACGCTTGAAACCCAAATTCTGA

Protein sequence :
MSAFQENSSQKNNAQENGQLPQDAFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHFRAGEPHAEVHALRMAG
ERARGATAYVTLEPCSHHGRTPPCADALIAAGVSRVVAAMQDPNPQVAGRGLHRLQQSGITVSHGVMMAEAEKVNVGFLK
RMRTGFPYVQLKMAASLDGRTAMASGESQWITSPQARQDVQRFRAESAAILSSSATVLADDPSLTVRWLELDADVQKRYS
EADLRQPVRVIVDSQQRVTPQHRVVSQPGETWLARVQADEQAWPQGVEQVMLPQHNGGVDLVALMMVLGRRQINSVWVEA
GASLAGALLNAGVVDELIVYLAPKLLGENARALCLLPGLDQLSQAPEFDIAEVRQIGPDLRLRLKPKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 1e-64 49
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 1e-64 49