Gene Information

Name : W5S_3025 (W5S_3025)
Accession : YP_006283980.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Outer membrane lipoprotein, group 4 capsule (G4C) polysaccharide
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3252592 - 3253695 bp
Length : 1104 bp
Strand : -
Note : -

DNA sequence : 
ATGGTGTCGGTAGCGCTACTTAGCGGTTGCACTCTGATTCCCGGTTCCCACCTTTCTACTAACGGCAAAAATGTAGTTGA
GCAGCAAGATACGGATTTTAATATCGATAAGCTGGTCAACGTTTACCCGTTAACGCCTTATTTAGTCGAAAAGATGCGTC
CTAAGCCGCTGATAGCGCAGACTAACCCCGCTTTGGAAAAAGAGTTGCAGGGTTACGAATACCGAATTGGTATTGGTGAT
GTCATTATGGTTACAGTATGGGATCACCCTGAACTGACGACACCAGCAGGGACATACCGTACTGCAGCCGATACGGGTAA
CTGGGTACACTCTGATGGGACGATTTTTTATCCTTACATCGGAAAAGTGAACGTCGCAGGAAAAACAGTTACTGAAGTCC
GCGATCAAATTATGGGACGCTTAGCACAGTACATCGAGTCACCACAGGTCGATGTCAGTATTGCTGCCTTCCGTTCACAG
AAAGCCTACGTGACGGGTGAAGTGGCAACGTCCGGGCAGCAGGCTATTACCAACGTACCTTTGACGGTGTTGGACGCGAT
TAACAGAGCTGGCGGGCTGACGCAGAATGCCGACTGGCGGAATATCGTTCTGACGCATAATGGACAAGAAAAACGACTCT
CCCTCCAGGCGCTGATGCAAAACGGCGACCTTTCACAAAATCATCTGCTTTACCCCGGTGATATCCTCTACATTCCTCGT
AATGACGACCTAAAAGTGTTCGTTATGGGAGAAGTTAAAAAACAAAGTACCCTTAAAATGGACCGTAGCGGCATGACGCT
GACGGAAGCGTTAGGTAATGCAGAGGGGATGGATCAGACATTTTCTGATGCTACGGGGATCTTTGTTATTCGTTCATTAC
GCGGAACACAAGGCCCTAAACTGGCAGATATTTACCAGCTTAATGCCAAAGACGCGACAGCGATGGTGATGGGTACGGAA
TTTCGGCTACAGCCTTATGATATTGTCTATGTCACCACAGCCCCGCTCGTCCGTTGGAATCGCGTTATCAGCCAGCTTGT
GCCGACCATTTCCGGCTTTAATGAGTTAACCGAGGGGACGTTACGTGTTCGTAACTGGCCGTAG

Protein sequence : 
MVSVALLSGCTLIPGSHLSTNGKNVVEQQDTDFNIDKLVNVYPLTPYLVEKMRPKPLIAQTNPALEKELQGYEYRIGIGD
VIMVTVWDHPELTTPAGTYRTAADTGNWVHSDGTIFYPYIGKVNVAGKTVTEVRDQIMGRLAQYIESPQVDVSIAAFRSQ
KAYVTGEVATSGQQAITNVPLTVLDAINRAGGLTQNADWRNIVLTHNGQEKRLSLQALMQNGDLSQNHLLYPGDILYIPR
NDDLKVFVMGEVKKQSTLKMDRSGMTLTEALGNAEGMDQTFSDATGIFVIRSLRGTQGPKLADIYQLNAKDATAMVMGTE
FRLQPYDIVYVTTAPLVRWNRVISQLVPTISGFNELTEGTLRVRNWP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf39 AAO18064.1 Orf39 Not tested TTSS locus Protein 9e-135 73