Gene Information

Name : W5S_0300 (W5S_0300)
Accession : YP_006281299.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Arabinose 5-phosphate isomerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 331417 - 332454 bp
Length : 1038 bp
Strand : -
Note : -

DNA sequence : 
ATGTCACAGTTTGAACAAGACGCTCACCTAAAACAGCAGTCTGACCGTGCACTATCCGAACATAGACTACAACCCGATTT
CGATTTCCAGCAGGCGGGCAAGCAGGTACTGAGTATCGAACGCGATGGGCTTGCGCAATTAGATCAGTATATTGACGACA
ATTTTACCCTCGCCTGCAAAAAGATCTTTAACTGCCAGGGCAAAGTGGTGGTGATGGGAATGGGCAAATCCGGTCACATC
GGTTGCAAGATTGCCGCAACCTTCGCCAGCACGGGTACACCTGCTTTTTTCGTTCATCCGGGCGAAGCCAGCCACGGTGA
CCTCGGCATGGTGACGCCGCACGATATCGTGATCGCGATTTCCAATTCTGGCGAATCCCATGAAATCCTGTCGCTGATCC
CTGTTCTGAAACGCCAGAAAGTGTTCCTGATCTGCATGACCAGCGCACCAGAAAGTACGATGGGTAAAGCGGCGGATATA
CACCTGTGCGTCCACGTTCCGCAGGAAGCCTGCCCGCTCGGTCTGGCACCCACCACCAGCACCACCGCAACACTGGTCAT
GGGCGACGCACTCGCCGTGGCTTTGCTACAGGCGCGCGGTTTTACTGCCGAAGATTTCGCCCTATCTCACCCCGGTGGCG
CACTTGGCCGCAAACTTTTACTGCGTATCAGCGATATCATGCATTCGGGCGACGAGATCCCCCATGTCTCACACGATGCC
TCACTGCGTGATGCGCTGGTGGAAATTACGCGCAAAAATCTGGGTATGACGGTAATCTGCGAAGCGGATATGAAAATTCA
GGGTATCTTTACCGATGGTGACCTGCGCCGCATCTTCGACATGAATATTGACTTGAACAGCGCGCGCATTGCTGATGTGA
TGACCGCGGGCGGCATCCGGGTCGCGCCGAACATGCTGGCGGTAGATGCACTTAACCTGATGCAGTCGCGCCACATCACC
TCAGTGCTGGTGGCAGAAAACGATCGTCTGGTCGGTATTGTTCATATGCACGATATGTTGCGGGCTGGCGTGGTTTAA

Protein sequence : 
MSQFEQDAHLKQQSDRALSEHRLQPDFDFQQAGKQVLSIERDGLAQLDQYIDDNFTLACKKIFNCQGKVVVMGMGKSGHI
GCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGESHEILSLIPVLKRQKVFLICMTSAPESTMGKAADI
HLCVHVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAEDFALSHPGGALGRKLLLRISDIMHSGDEIPHVSHDA
SLRDALVEITRKNLGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAPNMLAVDALNLMQSRHIT
SVLVAENDRLVGIVHMHDMLRAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 4e-51 43
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 3e-51 43
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 9e-51 43