Gene Information

Name : W5S_2923 (W5S_2923)
Accession : YP_006283878.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Ferric enterobactin ABC transporter, ATP-binding protein FepC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3144646 - 3145509 bp
Length : 864 bp
Strand : -
Note : -

DNA sequence : 
ATGTTTTCAGATAATGTGTCTTCAAAGAGTACGCTTCCCGCGAACAGTCGTTCCCGCGACGCAATTGCCAGCCACTCGCT
GACGCTACGTTACGATAAGCAGATCGTGATTGACGCGCTGGATATTGCGCTGCCAGCCCAGAAAATTTCAGTGCTGGTGG
GGAGTAACGGCTGCGGCAAGAGTACATTATTGAAGTCATTCGCCCGCCTGCTGAAACCGACAAGCGGGACGATTATTGTC
AACGGGGCGGATATCCATCGGCAATCTACCGTTGAGGTGGCGAAATCGCTGGCGATTTTGCCGCAAACGCCAACAGCACC
GGAAGGCTTGACGGTCTATCAACTGGTGAAAATGGGGCGCTATCCGCACCAATCGTGGCTGAAACAGTGGTCGGAAACCG
ACGAGGAAAAAGTGCTTCAAGCGCTGCGCAGCACGGGCGTGTTGGCATTAAAGGATCGCGCGGTGGATTCTCTGTCCGGC
GGGCAGCGGCAGCGCGTCTGGATCGCCATGACGCTGGCGCAGGATACCGATATCGTGTTGCTGGATGAGCCGACGACCTA
TCTCGATCTTGCGCATCAGATGGAGGTGCTGGATTTGCTACGGGAACTGAACGCTCAGCAGCAGAAAACCATCGTCATGG
TGCTGCACGATCTGAATTTGGCGTGCCGCTACGCGCATCACATGGTGGCCGTGCATAACCGGACGGTGTTTGCGCAGGGC
AATCCACGCGACATTCTCACCGAAGCTACGGTAAAAACGGTGTTTAACCTGAACTGTCGCATCATCGACGATCCATTTTT
CGGTACGCCGTTGTGCATTCCATTTGGGCGCGAGGCGGTGGAGGCTGCGACTGATGTCGGCTAA

Protein sequence : 
MFSDNVSSKSTLPANSRSRDAIASHSLTLRYDKQIVIDALDIALPAQKISVLVGSNGCGKSTLLKSFARLLKPTSGTIIV
NGADIHRQSTVEVAKSLAILPQTPTAPEGLTVYQLVKMGRYPHQSWLKQWSETDEEKVLQALRSTGVLALKDRAVDSLSG
GQRQRVWIAMTLAQDTDIVLLDEPTTYLDLAHQMEVLDLLRELNAQQQKTIVMVLHDLNLACRYAHHMVAVHNRTVFAQG
NPRDILTEATVKTVFNLNCRIIDDPFFGTPLCIPFGREAVEAATDVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 3e-56 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 3e-56 47
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-60 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-50 44
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 2e-56 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 2e-56 44
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 1e-56 44
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 1e-56 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_2923 YP_006283878.1 Ferric enterobactin ABC transporter, ATP-binding protein FepC BAC0164 Protein 3e-50 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_2923 YP_006283878.1 Ferric enterobactin ABC transporter, ATP-binding protein FepC VFG0925 Protein 2e-62 47
W5S_2923 YP_006283878.1 Ferric enterobactin ABC transporter, ATP-binding protein FepC VFG1042 Protein 2e-50 44