Gene Information

Name : W5S_2676 (W5S_2676)
Accession : YP_006283634.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : VgrG protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2897780 - 2899627 bp
Length : 1848 bp
Strand : -
Note : -

DNA sequence :
GTGGCCAACAGTACAGGATTGCAGTTCACCGTGAAGGTCGGCGCGTTGCCGGCCTCGACGTTTGCGGTGGTGGATTTTCA
GCTCAGCGAGGCGCTTAACCAGTCGTTTTCCCTGTCCCTCAATCTGGCCAGCGCCCTGCCGGATGTGGATTTTGGCGCGG
TGCTGGACCAGCCCTGTGAGCTGCTGATTTGGTTCGAAGGCGAGTTGAAGCGACGGGTGAGCGGGATAATCAGCGGCTTT
GCCCAGGGTGACACCGGCTTTCGCCGCACCCGCTATCAGGCGGAAGTGCGTCCGGCGTTGTGGCGACTCGGCTTACGCAC
CAACGCCCGCATTTTTCAGGCGCAGAAGCCAGAGGCGATTATCGGCACCCTGCTGGAAGAAGCCGGGATTACCGACTACG
CCTTCTCGTTACGTCATGACCATGCCCCGCGTGAATACTGCGTGCAGTACCGGGAAAGTGATTTGGCGTTTGTCACCCGA
CTGGCCGCCGAGGAAGGCTTGTACTTCTTCCACGAGTTTGAGGAAGGCAAACACCGGGTGGTCTTTGCCGACGATGCCGG
CGCACTGGCCAAAGGCCCTGAACTGTTCTTCAACCTCGCCACGCAGGGGCTGAGTGAAGGCGAATATGTCCACCGTTTCC
GCTACGCCGAGCGGGTCAGCATCGCCGAGGTGGCGCTCAAGGACTACAGCTTCAAAACCCCGGCCTATGGCCTGCTGCAC
AAGAAGATGAGCAGCGAACTGGCACACCAGCGCGAAAGCTATCAGCACTTTGACTACCCCGGACGCTTTAAAAAAGACCC
GAGCGGCAAGGCGTTCAGCCGCTACCGGCTGGATGCACTGCGTGCTGGGGCCATGACCGGCGCGGGGGACTCCAACGCCG
CGATGCTGATGCCGGGCAACAGTTTCATGCTCACCGAGCACCCCAACCTGCCCCTCAACACCGGCTGGCAAGTGGTTGCC
ATCACCCACAGCGGACAGCAACCGCAGGCGCTGGAGGAAGAAAGCGGCGGCGAACCGACCACCTACAGCAACAGCTTCGA
GGTCATCAGCGCCAAAACCACCTGGCGTGCGGACCTGCCGTACAAGCCGATGGTCGATGGCCCGCAGATTGCCACGGTGG
TGGGCCCGGCCGGTGAGGAAATCTACTGTGACGAATACGGCCGCATCAAGCTGCAATTCCCGTGGGACCGCTACGGGGCG
AGTGACGACCAGAGCTCCTGCTGGGTACGGGTGAGCCAGGGCTGGGCGGGCGGCCAGTACGGGCTGATAGCCATCCCGCG
CATCGGCCATGAGGTGATTGTCAGCTTCCTCGAAGGCGACCCGGACCAGCCGATAGTGACCGGCAGAACCTTTCATGCCA
CCAATCCGTCGCCGTACCCGCTGCCCGCCAACAAGACCCGTACCTCACTGCGGACCTCAACGCACAAGGGAGCCGGGTTC
AACGAGCTGCGCTTTGAAGACCAGGCCGGGCAGGAGGAGGTATTTATCCATGCCCAGAAGGACATGAACACCGTGGTGCT
CAATAACCGCAGCACCACCGTGACCGCTGACCATACCGAAAGCGTCGGCGGCAATCAGACGGTGTCGGTGGAGAAAGACC
AGCACACTGAAATTCAGGGGGAGCAGGCTATCGCCATTATTGGCAGTCGCAGCACCGTCATCGGTAAAGACGGCAAGGGA
AAGTCGCACGACTCCCTGCAGGTGAAAAACAATATCGCCATCCAGTCACAAAAGGGCGACATCCTGATAGCGACCAACGG
CGGTTTTATCGGCATCAGTGCCGAAGGTGACATCACCATCAAAGGCAAAACCATTACCGTCAACGGCAGCCGTATTGACC
TGAACTGA

Protein sequence :
MANSTGLQFTVKVGALPASTFAVVDFQLSEALNQSFSLSLNLASALPDVDFGAVLDQPCELLIWFEGELKRRVSGIISGF
AQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQAQKPEAIIGTLLEEAGITDYAFSLRHDHAPREYCVQYRESDLAFVTR
LAAEEGLYFFHEFEEGKHRVVFADDAGALAKGPELFFNLATQGLSEGEYVHRFRYAERVSIAEVALKDYSFKTPAYGLLH
KKMSSELAHQRESYQHFDYPGRFKKDPSGKAFSRYRLDALRAGAMTGAGDSNAAMLMPGNSFMLTEHPNLPLNTGWQVVA
ITHSGQQPQALEEESGGEPTTYSNSFEVISAKTTWRADLPYKPMVDGPQIATVVGPAGEEIYCDEYGRIKLQFPWDRYGA
SDDQSSCWVRVSQGWAGGQYGLIAIPRIGHEVIVSFLEGDPDQPIVTGRTFHATNPSPYPLPANKTRTSLRTSTHKGAGF
NELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTTVTADHTESVGGNQTVSVEKDQHTEIQGEQAIAIIGSRSTVIGKDGKG
KSHDSLQVKNNIAIQSQKGDILIATNGGFIGISAEGDITIKGKTITVNGSRIDLN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 1e-155 53
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-124 43
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 3e-124 43