Gene Information

Name : W5S_2581 (W5S_2581)
Accession : YP_006283541.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Psp operon transcriptional activator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2788747 - 2789733 bp
Length : 987 bp
Strand : +
Note : -

DNA sequence :
ATGCTTCAGGAAAAAGAGAACCTACTGGGCGAAGCCAACAGCTTTTTAGAGGTGCTGGAACAGGTGTCGCAGTTGGCACA
GTTAAATAAGCCGGTGCTGGTGATCGGCGAGCGCGGTACAGGCAAGGAGTTAATTGCCAGCCGCTTGCACTACCTTTCCC
CACGCTGGCAAGGGCCGTTCGTTTCCCTGAACTGCGCGGCGCTCAACGAAAATCTGCTCGATTCCGAGTTATTTGGTCAT
GAAGCGGGTGCCTTTACCGGGGCACAGAAGCGCCATCTGGGACGCTTCGAGCGCGCCGACGGCGGAACACTGTTTTTAGA
TGAACTCGCCACCGCGCCGATGCTAGTGCAGGAAAAACTACTGCGTGTGATCGAATACGGCATGCTGGAACGCGTCGGCG
GCAGAGATCAGCTTCAGGTTGACGTGCGTCTGGTGTGCGCCACCAATGACGATCTTCCTGCGCTGGCTGCCAGCGGTAAG
TTCCGCGCAGACCTGCTCGATCGTCTGGCCTTCGACGTCGTGCAACTTCCGCCGCTGCGCGAACGTCAGCAAGACATTAT
GTTATTAGCAGATAATTTTGCGATTCAGATGTGCCGCGAATTGCACCTGCCGCTGTTTCCCGGTTTTACCGCTACCGCAC
GCGAAACGCTGCTGAATTACGACTGGCCGGGAAATATTCGTGAACTGAAAAACGTGGTTGAACGCTCAGTGTATCGTCAC
GGCGATAGCGAACAGCCTCTCGATACCATCATTCTGAACCCCTTCCACCGAACTACCGCCATTCAGGAAAAACCACAGAC
AACATCGGGCCAGCCGGATTTACCGTTAGACATGAAGCCGTGGCTGCTGGAACAAGAGAAAGGCTTGATCGTTCGGGCGT
TAAATCAGGCGAAGTTTAACCAGCGCAAGGCCGCGGAGCTGCTGGGATTAACCTATCACCAGTTGCGCGGATTGCTAAAG
AAACACGATATTGCGGTGAATGAGTGA

Protein sequence :
MLQEKENLLGEANSFLEVLEQVSQLAQLNKPVLVIGERGTGKELIASRLHYLSPRWQGPFVSLNCAALNENLLDSELFGH
EAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGMLERVGGRDQLQVDVRLVCATNDDLPALAASGK
FRADLLDRLAFDVVQLPPLRERQQDIMLLADNFAIQMCRELHLPLFPGFTATARETLLNYDWPGNIRELKNVVERSVYRH
GDSEQPLDTIILNPFHRTTAIQEKPQTTSGQPDLPLDMKPWLLEQEKGLIVRALNQAKFNQRKAAELLGLTYHQLRGLLK
KHDIAVNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96283.1 HrpS/HrpR-like protein Not tested S-PAI Protein 4e-32 41
unnamed AAT96324.1 HrpS/HrpR-like protein Virulence S-PAI Protein 4e-32 41
unnamed AAT96363.1 HrpS/HrpR-like protein Virulence S-PAI Protein 5e-32 41