Gene Information

Name : W5S_2573 (W5S_2573)
Accession : YP_006283533.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Thiol peroxidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2780597 - 2781100 bp
Length : 504 bp
Strand : +
Note : -

DNA sequence : 
ATGTCACAGAACGTACATTTTCAAGGCAATCCTGTGCCAGTAGCAGGGGCATTTCCTGCTAAAGGAAGCAAAGCGCCAGC
ATTTACTCTGGTCGCTAAAGACCTGTCAGATGCTTCACTCAGCAACTATGCTGGCAAACGCAAAATCCTGAACATTTTTC
CAAGCATCGATACCGGTGTTTGTGCCGCGTCCGTGCGTAAATTCAACCAGTTGGGTTCTGAGCTGGATAACACCGTTGTT
CTGTGCATCTCTTCCGATCTGCCATTCGCGCAGTCTCGCTTTTGCGGCGCGGAAGGTCTGAACAACGTAGTTGTACTGTC
TACCTTGCGTGGCAGTGAATTCAAAGAAAGCTATGGCGTCGCTATCGCTGATGGCGCGTTGAAAGGCCTGACTGCTCGCG
CTGTCGTAGTGCTGGATGAAAACGACAACGTGCTGCATAGTGAATTGGTGAACGAAATCACCACTGAACCAGACTATGAC
GCTGCGCTGGCTGTACTGAAATAA

Protein sequence : 
MSQNVHFQGNPVPVAGAFPAKGSKAPAFTLVAKDLSDASLSNYAGKRKILNIFPSIDTGVCAASVRKFNQLGSELDNTVV
LCISSDLPFAQSRFCGAEGLNNVVVLSTLRGSEFKESYGVAIADGALKGLTARAVVVLDENDNVLHSELVNEITTEPDYD
AALAVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 4e-36 50
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 2e-36 50
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 3e-36 50
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 1e-36 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_2573 YP_006283533.1 Thiol peroxidase VFG0087 Protein 6e-37 50