Gene Information

Name : W5S_2518 (W5S_2518)
Accession : YP_006283478.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Succinic semialdehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2710311 - 2711783 bp
Length : 1473 bp
Strand : -
Note : -

DNA sequence :
ATGCAACCAAAACACTCTATTACACTGAAACAACAAACATTATTCCGTCAACACTGCCTGATTGACGGCGAGTGGCAAGA
CAGCCAAAACGATGAACGTCTGGATGTTACTAATCCGGCGACGGGTGAGGTGTTGGGTTGTGTGCCGCTCGTGACGGTGT
CACAAACTGAGCAGGCGATTGCTGCTGCGGAACGGGCGTTGGTTGAGTGGCGTAAGAAGACGGGAAAAGAACGTGCCGCG
CTGTTGCAGGCATGGGCGCGTCTGATTATGGACAATCAGGACGATCTGGCTGCGTTGCTGACGGCGGAACAGGGAAAACC
ATTGGTGGAAGCGCGCGGCGAAATTGCCTATGCCACCAGTTTTATCGACTGGTTTGCGGAAGAAGCCAAACGCATTGAAG
GCAGCGTATTGCAATCGCCGCAGGGGCAACAGCGCTTGATGGTGATTAAGCAGCCCATCGGCGTGTGTGCCGCGATAACG
CCGTGGAATTTCCCGGCTGCGATGATTACCCGTAAAGTCGGCCCCGCACTGGCGGCGGGCTGTACGATGATCGTTAAGCC
TGCCGAGCAGACGCCGTTTACCGCGCTGGCGCTGGCGGAACTGGCGCAGCAGGCGGGTATTCCGCGCGGCGTGTTGCAGG
TCATTGTTGGCGATGCGCAGTCAGTTGGTAAGGTGCTGTGTGATAGTCCGGTGGTACGCAAGCTGAGCTTCACGGGTTCC
ACGGAAGTGGGCCGGATCCTGATGGCGCAGAGCGCGCCGACGGTGAAAAAACTCTCGTTGGAGTTGGGGGGTAACGCGCC
GTTTATCGTGTTCGATGATGCTGATGTGGATCAGGCAGTGAAAGGCATTCTGGCCTCCAAATTCCGTAACAGCGGACAGA
CCTGCGTCTGTGCTAACCGGATCTATGTGCAGAACGGGATTTATCCGACGTTGGTAGAACGGCTGATCGAGGAAGTGCGT
AAGTTAAACGTGGGCGACGGTACGCAGCCCGGCGTGACGCAGGGGCCGCTGATTGATAACGATGCGGTCAGCAAAGTCGA
GCAGCACATTGCCGATGCGTTATCGCACGGGGCAACGCTATTGCTGGGCGGCCAACGCCACGAACGAGGCGGCACGTTTT
TCACACCAACGATTGTCGGCGACGTGACCCGCGAGATGCGTTTTGCACGTGAAGAGACGTTCGGGCCAGTTGCACCGCTG
TTCCGCTTCAGTGATGAAGCGGAGGTGATTGCGATGGCGAACGATACCGAATTTGGTCTGGCAGCCTATGTCTACACGCG
CGACGCCATACGCCAGTGGACAGTGCCGGAAGCGCTGGACTACGGCATGGTTGGCATCAATACCGGACTGATTTCGAATG
AAGTCGCACCGTTTGGCGGGGTGAAGCAGTCTGGACTGGGCCGTGAAGGCTCACGTTTCGGTATTGAAGACTATCTGGAA
ATGAAATATCTCTGCGTCGATCTTTCTCGGTAA

Protein sequence :
MQPKHSITLKQQTLFRQHCLIDGEWQDSQNDERLDVTNPATGEVLGCVPLVTVSQTEQAIAAAERALVEWRKKTGKERAA
LLQAWARLIMDNQDDLAALLTAEQGKPLVEARGEIAYATSFIDWFAEEAKRIEGSVLQSPQGQQRLMVIKQPIGVCAAIT
PWNFPAAMITRKVGPALAAGCTMIVKPAEQTPFTALALAELAQQAGIPRGVLQVIVGDAQSVGKVLCDSPVVRKLSFTGS
TEVGRILMAQSAPTVKKLSLELGGNAPFIVFDDADVDQAVKGILASKFRNSGQTCVCANRIYVQNGIYPTLVERLIEEVR
KLNVGDGTQPGVTQGPLIDNDAVSKVEQHIADALSHGATLLLGGQRHERGGTFFTPTIVGDVTREMRFAREETFGPVAPL
FRFSDEAEVIAMANDTEFGLAAYVYTRDAIRQWTVPEALDYGMVGINTGLISNEVAPFGGVKQSGLGREGSRFGIEDYLE
MKYLCVDLSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 1e-144 65
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 7e-82 42