Gene Information

Name : W5S_2495 (W5S_2495)
Accession : YP_006283455.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Iso-IS1 ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2686815 - 2687210 bp
Length : 396 bp
Strand : -
Note : -

DNA sequence :
GTGGCACTTATCTGCGAACTCGATGAGCAATGGAGTTTTGTTGGCAGTAAAGCCTGCCAGCACTGGCTCTGGTATGCGTA
CAACACCAAGACCGGCGGTGTATTGGCTTATACATTTGGCCCCCGAACTGATGAAACCTGCCGTGAGTTATTGGCAGTCC
TTGCGCCGTTTAACATCGGAATGGTAACCAGTGATGAGTGGGGCAGCTATGCCAGAGAAGTGCCGAAGGATAAGCATCTG
ACAGGAAAAATTTTTACCCAGCGTATAGAGCGTAACAACCTGACACTGAGGACTCGCATTAAACGTCTGGCCCGGAAAAC
CATCTGTTTCTCACGCTCGATTGAATTGCATGAAAAAGCCATCGGAGCGTTCATTGAAAAACACATGTTCTACTAA

Protein sequence :
MALICELDEQWSFVGSKACQHWLWYAYNTKTGGVLAYTFGPRTDETCRELLAVLAPFNIGMVTSDEWGSYAREVPKDKHL
TGKIFTQRIERNNLTLRTRIKRLARKTICFSRSIELHEKAIGAFIEKHMFY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1123 NP_286658.1 hypothetical protein Not tested TAI Protein 3e-42 70
Z1562 NP_287066.1 hypothetical protein Not tested TAI Protein 3e-42 70
insB NP_709463.1 IS1 ORF2 Not tested SHI-2 Protein 2e-24 43
EC042_4085 YP_006098368.1 transposase Not tested Tn2411 Protein 6e-25 43
EC042_4113 YP_006098397.1 transposase Not tested Tn2411 Protein 6e-25 43
insB NP_458736.1 insertion element IS1 protein InsB Not tested SPI-7 Protein 6e-25 43
S4059 NP_839227.1 IS1 orfB Not tested SHI-2 Protein 3e-24 43
insB NP_709451.1 IS1 ORF2 Not tested SHI-2 Protein 2e-24 43
tnpH AAD44742.1 TnpH Not tested SHI-2 Protein 2e-24 43
insB ADD91744.1 transposase Not tested PAI-I AL862 Protein 1e-24 43
InsB (Tn1) CAJ77072.1 Transposase Not tested AbaR1 Protein 7e-25 43
Z1192 NP_286727.1 IS1 protein InsB Not tested TAI Protein 2e-24 42
Z1632 NP_287135.1 IS1 protein InsB Not tested TAI Protein 2e-24 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_2495 YP_006283455.1 Iso-IS1 ORF2 VFG0612 Protein 7e-25 43