Gene Information

Name : W5S_2434 (W5S_2434)
Accession : YP_006283394.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Type VI secretion protein, VC_A0107 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2619819 - 2620349 bp
Length : 531 bp
Strand : -
Note : -

DNA sequence : 
ATGGCATCAACGAAATCCAGTGGGCAAAAGTTCATTGCCCGCAATCGCGCACCTCGCGTTCAGATCGAATATGACGTGGA
AATTTATGGCGCGGAACGCAAAATTCAGTTGCCGTTCGTCATGGGGGTATTGGCGGATCTGGTGGGCAAACCGCTGGAGC
CGCAGGTGGCCCTCGATGAACGTAAATTCCTCGAAATCGACATCGATAACTTTGATGAGCGCATGAAAGCGTTGAAGCCG
CGCGCTGCCTTTCAGGTGGATAACACGTTGAACGGCGAAGGTAAATTGAACATCGACCTGACTTTCGAAAGCATGGACGA
CTTCTCGCCTGACGCCATCGCGCGCAACGTTGAGCCGCTGAGCAAGCTGTTGGATGCACGTACCCAGTTGGCTAACCTAC
TGACCTATATGGACGGTAAAAACGGTGCGGAAGAACTGGTCGGTAAAATTTTGCAAGACCCCACGCTGCTGCAGGCGTTG
ACGCATCTGCCGAAGCAGGACGATGCCGCTGAAGGTAAGGAAGATCAATAA

Protein sequence : 
MASTKSSGQKFIARNRAPRVQIEYDVEIYGAERKIQLPFVMGVLADLVGKPLEPQVALDERKFLEIDIDNFDERMKALKP
RAAFQVDNTLNGEGKLNIDLTFESMDDFSPDAIARNVEPLSKLLDARTQLANLLTYMDGKNGAEELVGKILQDPTLLQAL
THLPKQDDAAEGKEDQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0297 NP_454879.1 conserved hypothetical protein Not tested SPI-6 Protein 3e-56 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_2434 YP_006283394.1 Type VI secretion protein, VC_A0107 family VFG2069 Protein 1e-59 72