Name : W5S_2424 (W5S_2424) Accession : YP_006283384.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Virulence Product : Type VI secretion protein, VC_A0110 family Function : - COG functional category : - COG ID : - EC number : - Position : 2609215 - 2611089 bp Length : 1875 bp Strand : - Note : - DNA sequence : ATGGACAGCAAACTGCTCGATTACTACAACCGTGAGCTCGCTTATTTGCATGAAATGGGCGCGGAGTTTGCTGCGCACTA TCCCAAAGTGGCAGGGCGTCTGGGCATGCGAGGGATCGATGTCGCCGACCCTTACGTTGAACGAATGCTGGAAGGTTTTG CCTTCCTCACTTCGCGTGTTCAACTGAAAATGGACGCTGAATTTCCGCGTTTTTCGCAGCGTATGCTGGAAATGATCGCG CCTGGTTACTTATCGCCAACGCCGTCAATGGCCATTGCCAAACTGACGCCAGATACGCAAAAAGGCGACATCAGCAATGG TTTCCTCGTGCCACGCGGCACCATGATGGAAAACCAAAATCTGAAAAAAAGCGGCGTCACCTGTAGCTACACCACGGCAC ATGACGTGATGCTGCAACCGTTATGCCTCAGCGATGTCTCGCTCGGCGGTGTACCGGCTGATATCCCTTTGGGTGAACTA AAACTGAGCGGCCTCGGTGCCGCCAGTGCATTGCGGATCCGTATTGAATGTGAAGGTGTTCCGTCGTTAGACCAGCTTAA GCTGGATGATGTAATACTGTACCTGAGTGGCCCGGATATCCAGGCGCTGAAGCTGTTGGAATTATTGATGCAGCATCGTG TCGGCATCCTGTTGCAATCCGTGGAAGAAAAGCCGCTGCGCCGGGTGTTAAGCGATGATGCGCTACAGCAGGAAGGGTTT GCACCAGAGCAGGCGTTGCTGCCAGACGACCTGCGTAACTTCGATGGCTATCGCCTGTTGCAGGAGTATTTTGCTTTTCC TGCCCGTTTCCAGTTCATCAGTTTAAGGCAGTTAGCGCCGTTCATTCGCTGCTGTGGCAACGCCCGAATCTTTGAAATTA TTATCTTGCTGGATAAAGCCGACAGCGCACTAGAGAGTGTGGTGGATGCCAGTCATCTGGCATTACATTGCACCCCCGTC ATTAATCTGTTCCCGAAAACCGCTGAACGTTTAAAGATCAGCGACAGCCAACACGAGTACCACTTGGTGGTCGATAATAT CCGTCCACTGGATTATGAAGTGCATTCGGTTCAGCGACTATTTGCCACGGTGGAAGGGAAACGAGAGGAGCAGATTTTCC GCTCTTTCTGGAGCACCTTCAGTGGCGATGGAAGCGATTACGGTGCCTATTTTTCGCTGCGGCGCGAGCAGCGCACGCTG TCCGAACAGGCGCAGCGCTATGGCACACGCACTGGCTACATCGGTTCGGAAGTTTTCCTGTCGCTGGTCGATGAGCACCA TACGCCGTGGCGTGATGACCTGCGTTATCTATCGGCAGACGTGATGTGTACCAGCCGTGATTTACCACTCATGCTATTAC AGCAGGATCAGGGCAACTTCGTGATGCCAGATTCGATCCCGGTGGGGCCGTTGACGTTGTGCAAAGGCCCAACGCCACCG CGTCCGGCGCTAGCAGAAGGCCTCTCATCCTGGCGGCTGATTAGCCATCTGCAAATGAATTACCTCAGTCTGATGGACTG CGCCGGCGGTGAAGGCGCTGCAGCATTGCGCCAGCTACTTAGCCTGTACGCCAACTTAGCCGATGCGCCAGTGTCACGCC AAATAGAAGCCATCCGCCATTGCCAGCTCAGCACCGTCAACCGCCGTGTACCTGAACCGGGGCCCGTAGTGTTTGCACGG GGTGTCAGTATCACGCTGGAGGTCGATGAACAGGCGTTTTCCGGTGCAAGCCCGTGGCTATTTGGCAGCGTCTTGGAACG CGTTTTCTCTCGACTGGTTGCGCTAAACAGTTTCACTGAATTTACCCTGAACAGTCAGCAGCGTGGCGAAGTCGGTTACT GGCCGCCTCGCATGGGCAAGAAGGCGTTGATATGA Protein sequence : MDSKLLDYYNRELAYLHEMGAEFAAHYPKVAGRLGMRGIDVADPYVERMLEGFAFLTSRVQLKMDAEFPRFSQRMLEMIA PGYLSPTPSMAIAKLTPDTQKGDISNGFLVPRGTMMENQNLKKSGVTCSYTTAHDVMLQPLCLSDVSLGGVPADIPLGEL KLSGLGAASALRIRIECEGVPSLDQLKLDDVILYLSGPDIQALKLLELLMQHRVGILLQSVEEKPLRRVLSDDALQQEGF APEQALLPDDLRNFDGYRLLQEYFAFPARFQFISLRQLAPFIRCCGNARIFEIIILLDKADSALESVVDASHLALHCTPV INLFPKTAERLKISDSQHEYHLVVDNIRPLDYEVHSVQRLFATVEGKREEQIFRSFWSTFSGDGSDYGAYFSLRREQRTL SEQAQRYGTRTGYIGSEVFLSLVDEHHTPWRDDLRYLSADVMCTSRDLPLMLLQQDQGNFVMPDSIPVGPLTLCKGPTPP RPALAEGLSSWRLISHLQMNYLSLMDCAGGEGAAALRQLLSLYANLADAPVSRQIEAIRHCQLSTVNRRVPEPGPVVFAR GVSITLEVDEQAFSGASPWLFGSVLERVFSRLVALNSFTEFTLNSQQRGEVGYWPPRMGKKALI |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
STY0289 | NP_454871.1 | hypothetical protein | Not tested | SPI-6 | Protein | 8e-120 | 45 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
W5S_2424 | YP_006283384.1 | Type VI secretion protein, VC_A0110 family | VFG2074 | Protein | 3e-126 | 45 |