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Name : W5S_2422 (W5S_2422) Accession : YP_006283382.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Virulence Product : Type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 2605504 - 2608113 bp Length : 2610 bp Strand : - Note : - DNA sequence : ATGTCAGAAATCAGCCGTGCCGTGTTATTCGGCAAGCTAGATACGTTGTTATTTACCTCGCTGGAAAGCGCCACCGCCTT TTGTAAACTGCGCGGTAATCCCTATGTTGAACTGGTGCATTGGCTGCATCAGTTGATGCAGCAACAAGAGGGTGACTTGC AGCGGGTCATCAGCCATTTTTCGCTGGATGAAAACGCACTGACGCGAGATATCGTTGCTGCCCTTGACCGCCTGCCACGT GGAGCGAGTGCAGTCTCCGACCTCGCTGAACACATTGATAGTGCTGTGGAGCGCGCCTGGGTTTACGCCTCGCTTAAGTA TGGTGCCACACGGATCCGTGGTGGCCATCTACTGATCGGCATGCTGAAAACCTTCAATCTCGCCAACGTGCTGAAAGGCA TTTCCAGCCAGTTTGCCCATATTAACGCCGATGCGCTGTTGGAGCAGTTCGATACGGTACTCGGCAGCAGCAAAGAAGCG CAGCAGGCGCTAATCACACCGCCGGGCGTAGACGGTGCCGCCCCGATAGCCAGCGATAGCACGCTGGCACAGTACGCACA GGATCTCACCGCGCGGGCGCGTGAAGGGCATATTGATCCGGTCACCGGACGAGACGAAGAGATTCGCCAGATGGTGGATA TTCTGATGCGTCGCCGCCAGAACAATCCGCTGCTGACCGGTGAGGCTGGCGTCGGTAAAACGGCGGTAGTAGAAGGACTG GCGCTACGGATTGCTACAGGCGCTGTGCCAGCACCGTTGCGCGATGTGCAGTTGTGGCTGCTGGATATCGGCATACTACA GGCCGGTGCTGGGATGAAAGGTGAATTCGAAGCGCGTTTACAGGCACTAATCAATGAAGTGCAGTCCAGTCCAACGCCCA TTGTGCTGTTTGTTGATGAGATCCACACGCTGGTCGGCGCGGGTGGACAGCAGGGCACGGGCGATGCCGCTAACCTGCTT AAACCGGCGTTGGCGCGCGGTCAGTTACGCACTATCGGCGCGACCACATGGGCTGAATACAAAAAATATATCGAGAAAGA TCCTGCACTGACACGCCGCTTCCAGACTGTACAGATACAGGAACCGGATGAAGACAAAGCGATTCTGATGTTGCGCGGTA CTGTTAGCGCACTGGAAAAGCATCATCAGGTGCTGCTGCTGGATGAAGCGGTCAGTGCGGCGGTGAAACTGTCGCATCGC TATATTCCCGCACGGCAGTTGCCAGACAAAGCCGTTGCCCTGCTTGATACCGCTTGCGCGCGGGTGGCGGTAAGCCAGAG CGCGCAGCCTGCGGCACTGGAAGATTGTTTGCATCGCTTGAATGCACTGGAGATTGAAGCAGAAATTACCGCGCGTGAAA CCAAAGTCGGCCTTGGTGACGCTGGGCGGCAGCAGGCGATTGCCGCCCAGCGCACGGAACTGGAAGCCGAACGTGATGCG TTGCAGCAGCGTTGGCAGAAGGAACGCGAGCTGGTTAATCAACTGATTGCGTTGTGTGGGCGTTGCGTGGTGGAAGGTGA AGCGGCATTGCGTGACGAATTGGGTATCGCTCGGCAGCGCTTGCGCGAGGTACAGAGCGAAACACCGCTGCTGTTCGCGG CGGTTGATGCTGGCGTGGTTGCGGCGGTTGTGTCTGACTGGACCGGCATTCCTCTGGGTCGTATGGTAAAGAACGAGATT GATGCAGTACTCAACCTTGCTGACACCCTGAATCAACGCGTGATTGGTCAGCGTCACGGCCTGGATTTGATCGCCAAACG TGTGCGCACCGCGCGCGCGCGCCTCGACAACCCTAACAAACCGGTCGGCGTGTTTATGCTGTGCGGTCCGTCGGGCGTCG GCAAAACGGAAACGGCGTTGGCTCTGGCGGAGTCACTGTATGGTGGTGAGCAGAACGTCATCACCATCAACATGAGCGAA TTTCAGGAATCGCACACCGTTTCCACGTTGAAAGGTGCGCCTCCGGGCTACGTGGGTTACGGCGAGGGGGGTGTGCTGAC CGAAGCCGTGCGTCGTCGTCCATACAGCGTAGTCTTGCTGGATGAGATTGAGAAAGCGCATCCAGACGTACATGAACTTT TCTTTCAGGTGTTCGACAAAGGCTGGATGGAGGATGGCGAAGGTCGGCATATCGATTTCCGTAACACCATCATCATTCTA ACCTCCAATGTCGGTACGCAGGTAATTAGTGCGTTGTGCGCCGATCCGGAACTGATGCCTGACCCTGATTCGCTCAGTGC CGCGCTGCGTAAACCGTTGTTGGAGGTGTTCCCGGCCGCGCTGCTGGGGCGTTTATTGGTCGTGCCATATTACCCGCTGA GCGATGCCATGCTGGCGAAGATTGTGCAGTTACAACTGGCACGCATTGTTCGCCGTTTGGCGGACAACCACGGCATTGAG ACTGAGATCGATGCCTCCGTGGTACACCTGATCGTACAGCGCTGCACCGAAGTTGAATCCGGTGGCCGTATGGTCGATGC CATCCTCACCAATACCCTGTTGCCGCAAATGAGCCAGATGTTGCTCAGCGCCCATGCCCGCGATGAACACTATCGCCGTA TATATGTGCGCTGTGAACAGGGCGAATTTGTTTGCCAATTCGATATCTAA Protein sequence : MSEISRAVLFGKLDTLLFTSLESATAFCKLRGNPYVELVHWLHQLMQQQEGDLQRVISHFSLDENALTRDIVAALDRLPR GASAVSDLAEHIDSAVERAWVYASLKYGATRIRGGHLLIGMLKTFNLANVLKGISSQFAHINADALLEQFDTVLGSSKEA QQALITPPGVDGAAPIASDSTLAQYAQDLTARAREGHIDPVTGRDEEIRQMVDILMRRRQNNPLLTGEAGVGKTAVVEGL ALRIATGAVPAPLRDVQLWLLDIGILQAGAGMKGEFEARLQALINEVQSSPTPIVLFVDEIHTLVGAGGQQGTGDAANLL KPALARGQLRTIGATTWAEYKKYIEKDPALTRRFQTVQIQEPDEDKAILMLRGTVSALEKHHQVLLLDEAVSAAVKLSHR YIPARQLPDKAVALLDTACARVAVSQSAQPAALEDCLHRLNALEIEAEITARETKVGLGDAGRQQAIAAQRTELEAERDA LQQRWQKERELVNQLIALCGRCVVEGEAALRDELGIARQRLREVQSETPLLFAAVDAGVVAAVVSDWTGIPLGRMVKNEI DAVLNLADTLNQRVIGQRHGLDLIAKRVRTARARLDNPNKPVGVFMLCGPSGVGKTETALALAESLYGGEQNVITINMSE FQESHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEIEKAHPDVHELFFQVFDKGWMEDGEGRHIDFRNTIIIL TSNVGTQVISALCADPELMPDPDSLSAALRKPLLEVFPAALLGRLLVVPYYPLSDAMLAKIVQLQLARIVRRLADNHGIE TEIDASVVHLIVQRCTEVESGGRMVDAILTNTLLPQMSQMLLSAHARDEHYRRIYVRCEQGEFVCQFDI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 0.0 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_2422 | YP_006283382.1 | Type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 0.0 | 59 |
| W5S_2422 | YP_006283382.1 | Type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 1e-142 | 43 |
