Gene Information

Name : W5S_0231 (W5S_0231)
Accession : YP_006281234.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Phosphomethylpyrimidine synthase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 259244 - 261184 bp
Length : 1941 bp
Strand : -
Note : -

DNA sequence :
ATGTCTACAGAACCAGTGCTGTCCAAATCAGGCCGCCGTGAGCAACGCGCCGCCGCCCAACAGTTTATTGAAACCTTACA
GGGAACCGCCTTTCCCAATTCCCAACGCATTTACCTTGCAGGCTCGCGCGACGACATCGCCGTACCAATGCGTGAAATTC
AGCTCAGCCCGACGCTACTCGGCGGCAGCAAAGACAATCCCCAATACGAACCTAATGAACCGATCCCGGTTTACGATACG
TCAGGGCCGTATGGCGATCCCGCGGCACAACCTGATGTCCGCGTTGGGTTAGCGAAGCTACGCGCCAACTGGATTGCAGA
GCGTCACGACACCGAAGCGTTATCCGGCGTCAGCTCCGATTTCACCCAGCAGCGTCTGGCGGATGCGGGTCTGGATCATC
TGCGTTTCGAGCATTTACCACGACCGCTGCGCGCCAAAACAGGCAAACGCGTCACCCAGCTTCACTATGCACGGCAGGGG
ATAATTACCCCGGAAATGGAATTTATCGCCATTCGCGAAAATATGGGACGCGAACGCATTCGCGGTGAAGTGCTGCGCCA
GCAGCATCCTGGGCAAAGTTTCGGTGCCCTCCTGCCGGAAAACATCACGCCGGAGTTTGTCCGTCAGGAAGTGGCCGCCG
GGCGCGCCATTATTCCTTCAAACATCAACCACCCCGAGTCGGAGCCGATGATTATCGGGCGCAATTTTCTGGTGAAGGTG
AACGCCAATATCGGTAATTCTGCCGTGACATCTTCCATCGAAGAAGAGGTGGAAAAGCTGGTCTGGTCTACCCGCTGGGG
TGCGGATACGGTGATGGACCTCTCAACTGGCCGCTATATTCACGAAACCCGCGAGTGGATCCTGCGCAACAGCCCGGTGC
CCATTGGGACGGTGCCGATCTATCAGGCACTGGAAAAAGTGAATGGCATGGCAGAAAACCTGAACTGGGAAATGTTCCGA
GATACGCTGCTGGAGCAGGCTGAGCAAGGGGTGGACTATTTCACGATCCACGCGGGCGTACTGCTGCGCTACGTACCGAT
GACGGCCAAACGCCTGACTGGCATCGTCTCACGCGGAGGTTCCATCATGGCGAAGTGGTGCCTGTCGCATCACAAAGAGA
GCTTCCTGTACGAACACTTCCGTGAAATTTGTGAAATCTGCGCCGCTTATGACGTCGCGCTGTCGCTGGGTGACGGGTTA
CGCCCAGGCTCCATTCAGGATGCCAACGACGAAGCTCAGTTCGCCGAGCTGCATACGCTGGGAGAGCTAACCAAAATCGC
CTGGGAATACGACGTACAGGTGATGATCGAAGGCCCCGGCCACGTTCCGATGCAGATGATCCGCCGCAACATGACCGAAG
AGTTGGAGCACTGCCACGAAGCACCATTCTATACGCTCGGCCCGCTGACCACCGATATCGCACCGGGTTACGATCACTTT
ACCTCTGGTATCGGTGCCGCCATGATCGGCTGGTTCGGCTGTGCAATGCTCTGCTACGTGACGCCGAAAGAGCATCTCGG
TTTGCCGAACAAAGAAGATGTCAAACAGGGACTGATTACCTACAAGATCGCCGCCCACGCCGCCGACTTGGCGAAAGGTC
ATCCCGGGGCGCAAATCCGTGATAACGCTATGTCGAAAGCCCGCTTCGAATTCCGCTGGGAAGATCAGTTTAATCTGGCG
CTCGATCCCCAAACGGCACGGGCCTACCACGATGAAACGCTGCCGCAAGAATCCGGTAAAGTCGCCCACTTCTGTTCTAT
GTGCGGCCCGAAATTCTGCTCGATGAAAATCTCGCAGGAAGTACGCGATTACGCCGCCAAACAGGAAGCCGAAGCCAAAC
CGATTGAAATCGGCATGGCTGAGATGTCGCAGGAATTCCGCTCTCGTGGCAGCGAGCTTTATCACAGTGCCACCAGCCTA
CAAGCCGAGGAAAACCAATGA

Protein sequence :
MSTEPVLSKSGRREQRAAAQQFIETLQGTAFPNSQRIYLAGSRDDIAVPMREIQLSPTLLGGSKDNPQYEPNEPIPVYDT
SGPYGDPAAQPDVRVGLAKLRANWIAERHDTEALSGVSSDFTQQRLADAGLDHLRFEHLPRPLRAKTGKRVTQLHYARQG
IITPEMEFIAIRENMGRERIRGEVLRQQHPGQSFGALLPENITPEFVRQEVAAGRAIIPSNINHPESEPMIIGRNFLVKV
NANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQALEKVNGMAENLNWEMFR
DTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHKESFLYEHFREICEICAAYDVALSLGDGL
RPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHF
TSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLA
LDPQTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAAKQEAEAKPIEIGMAEMSQEFRSRGSELYHSATSL
QAEENQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 72
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 72
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 71