Gene Information

Name : W5S_2105 (W5S_2105)
Accession : YP_006283066.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : IS1541, transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2290003 - 2290461 bp
Length : 459 bp
Strand : +
Note : -

DNA sequence :
ATGAGGGACGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCACATAGTTTTTGCGCCGAAGTATCGAAGGCA
GGTGTTCTACGGGGAAAAACGCAAAGCGATAGGCAGTATTTTAAGAAAGCTATGCGAATGGAAAAACGTGAATATTCTGG
AAGAGGAATGCTGTGTGGATCACATCCATATGCTTCTGGAAATTCCGCTCAAGATGAGTGTCTGGGGATTTATGGGGTAC
CTGGAGGGAAAGAGTAGCCTGATGCTTTATGAGCAGTTTGGCGATTTGAAGTTCAAATACCGTAACAGGGAGTTTTGGTG
CCGAGGGTATTACGTTGATACAGTAGGGAAAAACACGGTCAGGATACAAGAATACATAAAGCACCAACTGGCAGAGGATA
AAATGGGTGAGCAACTCTCGATCCCGTATCCCGGTAGCCCGTTTACGGGCCGTAAGTAA

Protein sequence :
MRDEKSLAHTRWNCKYHIVFAPKYRRQVFYGEKRKAIGSILRKLCEWKNVNILEEECCVDHIHMLLEIPLKMSVWGFMGY
LEGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTVRIQEYIKHQLAEDKMGEQLSIPYPGSPFTGRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpA NP_455584.1 transposase for insertion sequence element is200 Not tested SPI-5 Protein 6e-64 90
CPR_0382 YP_697711.1 IS1469, transposase Not tested Not named Protein 1e-40 62
SP_1064 NP_345538.1 IS200 family transposase Not tested PPI-1 Protein 1e-44 61
EF0615 NP_814372.1 IS200 family transposase Not tested Not named Protein 1e-30 53
ef0123 AAM75324.1 EF0123 Not tested Not named Protein 7e-31 53