Gene Information

Name : W5S_0192 (W5S_0192)
Accession : YP_006281203.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Resistance
Product : O-succinylhomoserine (Thiol)-lyase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 214834 - 215994 bp
Length : 1161 bp
Strand : +
Note : -

DNA sequence : 
ATGACGCGTAAACAGGCAACGATCGCAGTCCGCAGTGGGTTAAATAATGACGAGCAGTATGGCTGCGTTGTCCCCCCCAT
TCACCTTTCCAGCACGTATAACTTTACCGGATTCAACCAGCCACGCGCCCACGACTATTCGCGTCGCGGTAACCCCACGC
GCGATGTGGTGCAGCGTGCGCTTGCCGAATTGGAAGGCGGTGCGGGTGCGGTAATGACGAGCAGCGGGATGTCGGCGATT
ATGTTGGTTTGCACGGTGTTCCTGCGCCCCGGCGATCTGCTGGTGGCTCCCCATGACTGCTACGGTGGCAGCTATCGTTT
GTTTGACAGCCTGAGCAAGCGCGGCGCATTTCGCGTTAAATTTGTCGATCAAGGTGATACCGATGCACTCAATGCTGCAT
TGGCAGAAAAACCAAAGCTGGTGTTGGTGGAAAGCCCAAGCAATCCGCTGCTGCGTGTCGTGGATATTGCCGCGATTTGT
CAGGCTGCACGGGAAGTGGGGGCGGTCAGCGTGGTGGATAATACTTTCCTGAGCCCGGCGTTGCAGAAACCGCTGGAACT
GGGGGCTGACCTGGTGGTGCATTCGTGCACTAAATACCTGAATGGTCACTCTGATGTGGTCGCGGGCGCCGTGATCGCCA
AAGATGCCGACACCATTACTGAACTGGCTTGGTGGGCGAACAATATCGGTGTAACGGGGGCGGCGTTCGATAGCTATTTG
CTGCTCCGTGGCCTGCGTACCTTATCGCCGCGTATGGCGGCCGCGCAGCGTAATGCGCAACAGGTGGTTGAATTCTTACA
GACGCAGCCGCTAGTGAAGGCGCTGTATCATCCTTCACTGCCGAACAATCCCGGCCATGATATTGCCCGTCGTCAACAAT
CTGGCTTTGGCGCTATGCTAAGTTTTGAGCTGGATGGAGATGAAGACACTCTGCGGCGTTTTCTGGCCTCGTTGGAGCTG
TTTACGTTGGCGGAATCGCTGGGCGGAGTCGAGAGCCTTATCTCGCATGCGGCAACGATGACGCATGCGGGGATGGCACC
AGAGGCGCGTGCCGCAGCGGGTATCTCTGAAACATTACTGCGTATTTCTACCGGTATTGAAGACGGCGATGATCTGGTTG
CCGATCTGGATCGTGCGTTTCAAGCCGCAGCCAAGAGGTAA

Protein sequence : 
MTRKQATIAVRSGLNNDEQYGCVVPPIHLSSTYNFTGFNQPRAHDYSRRGNPTRDVVQRALAELEGGAGAVMTSSGMSAI
MLVCTVFLRPGDLLVAPHDCYGGSYRLFDSLSKRGAFRVKFVDQGDTDALNAALAEKPKLVLVESPSNPLLRVVDIAAIC
QAAREVGAVSVVDNTFLSPALQKPLELGADLVVHSCTKYLNGHSDVVAGAVIAKDADTITELAWWANNIGVTGAAFDSYL
LLRGLRTLSPRMAAAQRNAQQVVEFLQTQPLVKALYHPSLPNNPGHDIARRQQSGFGAMLSFELDGDEDTLRRFLASLEL
FTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGDDLVADLDRAFQAAAKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAR0460 YP_039909.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 2e-58 42
SAS0418 YP_042545.1 Cys/Met metabolism PLP-dependent enzyme Not tested vSa¥á Protein 8e-60 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_0192 YP_006281203.1 O-succinylhomoserine (Thiol)-lyase BAC0207 Protein 1e-49 42