Gene Information

Name : W5S_1631 (W5S_1631)
Accession : YP_006282595.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : Phage transcriptional regulator, AlpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1780529 - 1780723 bp
Length : 195 bp
Strand : -
Note : -

DNA sequence : 
ATGACAGCTCATCAGTTATTACGTCTGAAACAAGTGGAAGTAAAAACCGGTCTGAAACGCTCGCAAATCTACCTGTACAT
GAAAGAAGGCACCTTTCCCTCCTCAATAAAGATTGGACCTGCCAGCGTAGCCTGGCTGGAATCTGAAATTGACGAATGGA
TTAACCTCAAATTAGCTAACCGCTTAATGCGCTAA

Protein sequence : 
MTAHQLLRLKQVEVKTGLKRSQIYLYMKEGTFPSSIKIGPASVAWLESEIDEWINLKLANRLMR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 2e-20 89
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 3e-20 86
unnamed CAA21398.1 - Not tested HPI Protein 4e-20 86
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 7e-09 50
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 3e-11 48
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 48
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 48
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 1e-09 48
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 4e-10 42
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 8e-10 41
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 8e-10 41
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 8e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_1631 YP_006282595.1 Phage transcriptional regulator, AlpA VFG1118 Protein 4e-10 48
W5S_1631 YP_006282595.1 Phage transcriptional regulator, AlpA VFG1141 Protein 2e-10 41