|
Name : W5S_1624 (W5S_1624) Accession : YP_006282588.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Resistance Product : Type IV secretion system protein virB4 Function : - COG functional category : - COG ID : - EC number : - Position : 1773638 - 1776385 bp Length : 2748 bp Strand : - Note : - DNA sequence : ATGACCACCCTGAACAAAGCACTGACCCGCCCTGCCGCCATTATGGGCATCCCTCTCGTCCCGTTCGTGATCGTCAGCGG GGCTATTGTCCTGCTGTCGGTTTACACAAGCTATTACCTTGCCTTGTTATTAATCCCTGCCTGGCTGGAAATGAAGGCAA AGGCCCGAACGGATATTCATTATTTCGGACTGCTGTGGCTGGCCTTTAAAACCCGTGGACGATTTGCCACCAATCGCCAT TTCGGTGCCCGTGTCATGCTGGCAAGCCACTATGACGCCGTCGATGTTTCGGAGTTTACCGCTAAGATGAAATTAAACGA GCGCATCACGCTGGATAAATACATTCCTTACTCCTCCCACATTCATCCTCACATCATAAGAAATCGCGCCGGTGATTTAG TCTCTAGCTGGGAATTGGGCGGCACTGTGTTTGAATGTGAGGATGAACATCATCTGGCATTGCTGGCAAGCCACCTTAAC AACCTGATCCGCTCGTATGAAGGGCTACCGTTCACCTTCTATATTCACCGCATACGAGAGAAATATCAGGATGGCTTTAA CGCCAGTTCGGGCATTCCCTTTTCGGATGAGGTCACAGAACGTTATTACCAGCCAATAAAAGAGAAACCGCTCTGGCGGC ATCGGCTGTTTTTCACCGTCTGTTATGTCCCTTCCTCCACACTGGAGAAAAAAATCATGAAGACGCAGACGGCCGGAAAA AGGAAAGCAGCACTGGATGATGCTCTGAAAGGGATGCTGGAGCACCATGACGCCATCAACACCGCCCTGTCACGTTACGT GGCAACACCATTGGGCCTCTATGAGGAAAAAGGTCGGGTTTACTCTTCACAACTGGCTTTCTACCATCGGCTGATTACGG GCAAATGGCAGAACGTAGCGGTGACACGCACACCGTTTTATCACGCACTCAGCACGCCGGATGTGTTCTTCACTACCGAT ACCGCAGAGTGTCAGACGGTCGGCGGTTCCCGCTTCTTCCGCAGTCTGGAAATTAAAGACTATTCACCTGAGACCTATAC CGGCCTGCTCGATGCGCTGCTGTATGCCGAAAGCGAGTATGTGCTGACGCAGTCTTTTACCTGTATGGCACGGGATGAAG CGCAAAATTATATCCGACTGGCGGAAAAACGGCTGAACTCAACCGATGATGACGCCATTTCACAGCGTGAGGAATTGATC GTCTTACGCGATCTGCTCCAGTCCGGGCATGTGTCTTGCGGCAAGTATCACTTCTCGCTGCTGGTCTCCTCAGCCAGCGC CGATCAGGTGGTAAAGGAAGCCAATGCGCTGGCTCAGCCTTTTAACGACCTCGGCATCATGACATCCCTGTCTACGCTAT CGTTACCTGCCGCTTATCTGGCTCAACTTCCCGGCGTATATACGTTACGCCCCCGTCTGGTGGTGGTCAGTAGCCAGAAT TACGCGGATATGGGGAGTCTGCATAACTTTCATCCTCACAAGCGTAACGACAATCCGTGGGGTGACGCTATCGCTATCCT GAAATCCCCCGGTGGCGGCAGTTACTACCTGAATCTGCATGACAGCCAGGCAGGACGAAATGACTTCAATGAGAAAACGC CGGGAAATACCGCCATCATCGGTAAAACAGGTTCAGGAAAGACCCTGCTGATGACGATGATGAAGCAGTTGATGCAGAAG TACCGCAATCCGGCAACATTTTCCGCCTCTGCCACCATCAAAAGGCTGACCACCGTTTACTTTGATAAAGACAGAGCGGC GGAGATGTCTATCCGCCAGATGGGCGGTCGCTACTTCCGTATCCGAACCGGTATCCCTACCGGATTCAACCCGTTTTCAC TTGCCCCCACTCGGCGGAATATCAGCTTTATCAAGCGGCTGATCCGGATGCTGTGCCGTCGTGACGGTAAGCCACTCGAT CCCCGCGATGAAGAGCGTATCAGCACTGCGGTGGATACCATCATGCTGGACTATCCGCCGGAATATCGCCGCTATGGTAT TACCCGATTGCTGGAAGTGTTGCCCGAACCCCCGACCAAAGAGGCCCGGACTAACGGCCTGCGTATACGCCTGAAACAGT GGGCGCAGGGCGGTGAATTCGGCTGGGTATTCGATAACGAGGAGGACACGTTTAACATCAGCAATATTGATAACTTTGGT ATCGACGGTACGGAATTCCTGGATGACGACGACATACGCGGGCCGGTCACCTTTTACCTGCTGTACCGCGTCACTAGCCT GCTGGATGGTCGCCGACTGGTGATGTTCATGGATGAGTTCTGGAAATGGCTGGCTGATGTCGAGTTTTCTAAATTCTCCC TCAATATGCTCAAGGTGATCCGCAAACTGAACGGCATTTTTATCCCCGCCACTCAGTCACCCGATGAAATCGTCAGGCAC CCCATCGCTCCGGCGATTATTGAGCAGTGCAGTACCCAGATTTTTCTCGCCAATCCCAAGGCCAACCATGCGGATTACGT GGAGAAAATGAAAGTCCCGGAAAGCGTTTATGACGTTGTTCGCAACCTTGATCCCAGCGAGCACTATATGGTTGTCCTGA AAACACCACTGCGTGCTGGTGAAACTCGCCCGTTTGTTGCCATGGCAAGAATGGATTTATCGGGCCTCGGAAACATCACC AAAATCCTGAGCGGCAGCGAAGACAACCTGAAAATATTTGATGCCATTTATCAGGAAGGTATGTCCCCTCAAGACTGGAA AGAAACGTTCCTTAACCAGGCTATCTGA Protein sequence : MTTLNKALTRPAAIMGIPLVPFVIVSGAIVLLSVYTSYYLALLLIPAWLEMKAKARTDIHYFGLLWLAFKTRGRFATNRH FGARVMLASHYDAVDVSEFTAKMKLNERITLDKYIPYSSHIHPHIIRNRAGDLVSSWELGGTVFECEDEHHLALLASHLN NLIRSYEGLPFTFYIHRIREKYQDGFNASSGIPFSDEVTERYYQPIKEKPLWRHRLFFTVCYVPSSTLEKKIMKTQTAGK RKAALDDALKGMLEHHDAINTALSRYVATPLGLYEEKGRVYSSQLAFYHRLITGKWQNVAVTRTPFYHALSTPDVFFTTD TAECQTVGGSRFFRSLEIKDYSPETYTGLLDALLYAESEYVLTQSFTCMARDEAQNYIRLAEKRLNSTDDDAISQREELI VLRDLLQSGHVSCGKYHFSLLVSSASADQVVKEANALAQPFNDLGIMTSLSTLSLPAAYLAQLPGVYTLRPRLVVVSSQN YADMGSLHNFHPHKRNDNPWGDAIAILKSPGGGSYYLNLHDSQAGRNDFNEKTPGNTAIIGKTGSGKTLLMTMMKQLMQK YRNPATFSASATIKRLTTVYFDKDRAAEMSIRQMGGRYFRIRTGIPTGFNPFSLAPTRRNISFIKRLIRMLCRRDGKPLD PRDEERISTAVDTIMLDYPPEYRRYGITRLLEVLPEPPTKEARTNGLRIRLKQWAQGGEFGWVFDNEEDTFNISNIDNFG IDGTEFLDDDDIRGPVTFYLLYRVTSLLDGRRLVMFMDEFWKWLADVEFSKFSLNMLKVIRKLNGIFIPATQSPDEIVRH PIAPAIIEQCSTQIFLANPKANHADYVEKMKVPESVYDVVRNLDPSEHYMVVLKTPLRAGETRPFVAMARMDLSGLGNIT KILSGSEDNLKIFDAIYQEGMSPQDWKETFLNQAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAP70302.1 | Pilx3-4/VirB3-4-like protein | Not tested | HPI | Protein | 0.0 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_1624 | YP_006282588.1 | Type IV secretion system protein virB4 | BAC0398 | Protein | 0.0 | 55 |
