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Name : W5S_1575 (W5S_1575) Accession : YP_006282539.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Virulence Product : Chaperone protein PapD Function : - COG functional category : - COG ID : - EC number : - Position : 1719457 - 1720242 bp Length : 786 bp Strand : + Note : - DNA sequence : ATGAAACAACAAGCAAATGTCACAAGAACGATGCGGACATTCCCGCTGAAGCCTGTGGTGATAGGTTTGGCCATACTGAG TGCGCTGGCCACTCAACAAAGTCAAGCGGCTATAGCTTTAGATCGTACCCGGGTTATTTTTGACGGCAGTCAGAATTCGG TAAGCCTGGATATCAGCAACCAGAATAAACAGTTGCCGTATCTGGCACAAGGATGGGTGGAAGATGAGAAAGGTAATAAA ATTCAGGGGCCACTCGCTGCATTACCGCCGGTGCAGCGTATAGAACCGGGTAAACCCGGTCAGATAAAAATTCAGGCGCT GCCAGTGATTGGGCAATTACCTCAGGATCGTGAATCGCTGTACTACTTCAATCTGCGGGAAATTCCGCCCAGAAGTACAA AGCCGAACACGCTGCAAATAGCGTTGCAGACGCGGATTAAACTGTTCTACCGTCCTGCTGCTATCGTCATGGACAAAAAT GCGGCTCCACCGCAGGAAAAACTGACGCTTAGTCGACAGGGAGACAAGTACATCGTTAATAATCCCACTCCTTACTACAT TACTTTGGTGGATGCTGGAAGTAAGAAAGATATTGCTGGAGTAGCGGGCTTTGAACCGATGATGATTCCACCGAGAGGGA GTATGCCGTTGACGGTCAGTGCCGCTAGCGTCGGTAACCGTCCTGTACTCACCTATGTCAATGACTATGGTGGACGCCCA CAATTGACCTTTACCTGTTCCGGTGTGGGTTGCACGGTCATACCTGAAAAGGGAACGGGTCACTGA Protein sequence : MKQQANVTRTMRTFPLKPVVIGLAILSALATQQSQAAIALDRTRVIFDGSQNSVSLDISNQNKQLPYLAQGWVEDEKGNK IQGPLAALPPVQRIEPGKPGQIKIQALPVIGQLPQDRESLYYFNLREIPPRSTKPNTLQIALQTRIKLFYRPAAIVMDKN AAPPQEKLTLSRQGDKYIVNNPTPYYITLVDAGSKKDIAGVAGFEPMMIPPRGSMPLTVSAASVGNRPVLTYVNDYGGRP QLTFTCSGVGCTVIPEKGTGH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 6e-56 | 55 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 8e-56 | 55 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 7e-56 | 55 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 7e-56 | 55 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 6e-56 | 55 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 6e-56 | 55 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 2e-50 | 54 |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 4e-55 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_1575 | YP_006282539.1 | Chaperone protein PapD | VFG1547 | Protein | 4e-56 | 55 |
| W5S_1575 | YP_006282539.1 | Chaperone protein PapD | VFG0896 | Protein | 3e-56 | 55 |
| W5S_1575 | YP_006282539.1 | Chaperone protein PapD | VFG0885 | Protein | 7e-51 | 54 |
