Gene Information

Name : W5S_1538 (W5S_1538)
Accession : YP_006282504.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : HTH-type transcriptional regulator alsR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1681123 - 1682049 bp
Length : 927 bp
Strand : -
Note : -

DNA sequence :
ATGAGGATACGCTACCTGCGGTATTTCCTGATCGTTGCAGAAGAGCAAAGTTTCACCCGAGCTGCGGCCAGAGTTCATAT
CGAACCATCACCTTTATCCCGAGCCATCAAGGAACTGGAGAACCATCTGGGGGTTCAACTGCTTCATCGGTCCAAAGGAC
GTATCAGGCTGACCTGGCCAGGCGAAGTGTTTCGTGAAGAGGCTCAACGCATTATTGCCTTTATAGAGAACGCTCAAACA
CGGGTTAACTCAGCCTCGCAGGGCTACCGTGGTCGGCTGCGTATTGGGCTTGCAGACAGCCTGGCTCCACCAAGACTGAC
AACACTGCTCGCTCGTTGTCGTGAGGAGGAACCTAGCACCGAGATTAGAATCACGGAAATGACCGTCAGCGAGATGTTAC
TGGCAATCAGTCACGATCAAATCGATGTTGGTTTTACTGTCGATAATTCAATCATACCGGGGTATCTCAAAGAGGTTGTA
TGGACTGAGCGCCCAGCCATTGCGATCCCAACTCATCACCCATTACTTTCACAAGAAAAAATCTCTGACGCCGAGATACT
TCGCTATCCGCTAGTGCTTTGCCACCCCGAACAGTGCACTGGTGGATATAACCTGACTCGACATTTGTTCAGCAATCCGT
CACTCCCTACTCCAAACATTGCCGAATATGTTTCAGGGCATGAACCCATGATCATGTTAGTTGCAGCAGGCTATGGAATC
GGTATCGGGCTGGCATCCCAAATTGCTCTCTATAACCATCCAAATGTCATTATCAGAGAAGCAGCAGACAATATTCCCAG
CACAGCTACGTTTGTCGTAACAGCAGAAAGAGAACGCTCAGCAGAGCTGGTTCGATTTATCAACCGGGCTATCGCAATCG
GAGAAATGCCAACTTTGCCGCACGCCCCACCGACCCGAACACTGTGA

Protein sequence :
MRIRYLRYFLIVAEEQSFTRAAARVHIEPSPLSRAIKELENHLGVQLLHRSKGRIRLTWPGEVFREEAQRIIAFIENAQT
RVNSASQGYRGRLRIGLADSLAPPRLTTLLARCREEEPSTEIRITEMTVSEMLLAISHDQIDVGFTVDNSIIPGYLKEVV
WTERPAIAIPTHHPLLSQEKISDAEILRYPLVLCHPEQCTGGYNLTRHLFSNPSLPTPNIAEYVSGHEPMIMLVAAGYGI
GIGLASQIALYNHPNVIIREAADNIPSTATFVVTAERERSAELVRFINRAIAIGEMPTLPHAPPTRTL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
bphR AAN62326.1 putative transcriptional regulator Not tested PAGI-3(SG) Protein 9e-98 66
bphR AAN62138.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 1e-49 41