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Name : W5S_1525 (W5S_1525) Accession : YP_006282491.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Unknown Product : DNA topoisomerase Function : - COG functional category : - COG ID : - EC number : - Position : 1669020 - 1671032 bp Length : 2013 bp Strand : - Note : - DNA sequence : ATGAAGCTATTTCTGTGCGAGAAGCCCTCTCAGGGCAAAGATATCGGACGTGTACTGGGGGCTACCCAGCGAGGCAAGGG TTGCCTCACCGGTTCAGGTATCACCATAACCTGGTGCATCGGTCATCTCGTTGAAGCAGCACCGCCCGATGCCTATGGCG AGCAATACAAACGCTGGTCTATCGAGCAATTGCCCATTATCCCCGAGCGCTGGCGCGTCGACGTCAAATCCAAGACCGCC TCGCAGTTCAACGTCGTCAAAGACCTTCTGAGCAAGGCAAGCGAACTGGTCATCGCAACGGATGCTGACAGGGAAGGCGA GTTGATCGCACGTGAGATCATCGAACTGTGCGGTTATCGCGGCCCCATCCAGCGGCTCTGGTTATCGGCGCTAAATGATG CGTCGATCCGCAAAGCACTGGCAACGCTCAGGCCATCAAGCGAAACCCTGCCGATGTACTTCTCGGCCTTGGCCCGTTCC CGCGCAGACTGGCTGATTGGCATGAATCTCAGTCGCCTGTTCACCGTTATGGGGCGGCAGGCCGGTTACGACGGCGTCCT CTCCGTGGGCCGGGTACAAACCCCAACGCTGAAACTGGTTGTCGATCGCGACCGCGAGATCGCATGCTTTGTCTCTGTAC CGTTCTGGGCAGTCGAGACTACACTATCGAGCGAAGGTCAATCTTTCACTGCTGCCTGGCTTGCACCAGATACAGCAACA GACGATGCCGGCCGCTGCCTGCAGGAATCCATAGCCCGGCAGGCGGTGGAACGCATGCGTTCGGCTGGTAGCGCACAGAT CACGTCCGTCGAAACTGAACGCATGCGTGAAGGCCCGCCATTACCCTTCGATCTGGGCACGCTGCAGGAAATCTGTTCAA AACAGTTGGGTCTGGACGTGCAGGAAACCCTGGAAATCGCTCAGGCACTGTACGAAACTCACAAAGCGACAACGTACCCG CGCTCAGACTCCGGCTATCTGCCCGACAGCATGTTCGCCGAGGTGCCCACCGTACTCGACAGTCTTCTCAAGACCGATCC TGGCCTGCGACCGCTCGTTGACCAGCTAGACCGCAACCAGCGCTCACGTGCCTGGAACGACAGCAAAGTCACGGCGCACC ACGGCATCATTCCCACGCTCGAACCCGCCAACCTTAAGGCAATGAATGACAAGGAACGGGCAGTCTATATGCTGATCCGT GCCCACTATCTGGCGCAGTTTCTGCCACAACATGAGTTTGACCGCACCACTGCACGCTTATCCTGTGCGGGTGAAACGCT ACAGGCTGTCGGCAAGCAGGTCGTCGTCATCGGGTGGCGGCAGGTGCTCGCTGAGCCCAGGCCAGACGATGATGGCGAGA CCACTCCACGCAGCCAGGTTCTGCCAGCGCTGCATGAAGGTTTGTCTTGCCAGATCACTGGAATCGACTGCAAAGCGCTC AAGACATCGCCGCCACGTCCTTATACCCAGGGCGAACTGGTCAAAGCGATGAAGGGCGTTGCCAAATTGGTTGCCGATCC ACGCCTGAAGCAAAAGCTGAAGGACACCACGGGTATCGGCACTGAGGCGACTCGCGCCAATATCATCAAAGGATTGCTTG ACCGTGGCTACCTGCAGAAGAAAGGCCGTTCGGTACGTGCCTCCGATGCGGCCTTCACACTCATCGACGTCGTTCCCGGT GCCATTGCCGATCCCGGCATGACCGCCATCTGGGAACAGGCGCTGGACATGATCGAAGCCGGTCAGCTCACTCTTGATGT CTTCATCGACAAGCAGTCAGCCTGGATCACGCAGTTGGTACAGCAGTATCAAGGAGCATCGCTGTCTATCAAGGTGCCAC AGGGACCTGCATGCCCAGAATGCGGCACCGCTATGCGTCAGCGTACTGGCAAAAGCGGGCCATTCTGGTCTTGCCCTCGC TATCCTGACTGCAAAGGCTCTCAGCCTATCGACAACGGCAAACACAAACGTGCTATGCCGCGCAAACGTAACAGCAGCAC ACGGGCATCCTGA Protein sequence : MKLFLCEKPSQGKDIGRVLGATQRGKGCLTGSGITITWCIGHLVEAAPPDAYGEQYKRWSIEQLPIIPERWRVDVKSKTA SQFNVVKDLLSKASELVIATDADREGELIAREIIELCGYRGPIQRLWLSALNDASIRKALATLRPSSETLPMYFSALARS RADWLIGMNLSRLFTVMGRQAGYDGVLSVGRVQTPTLKLVVDRDREIACFVSVPFWAVETTLSSEGQSFTAAWLAPDTAT DDAGRCLQESIARQAVERMRSAGSAQITSVETERMREGPPLPFDLGTLQEICSKQLGLDVQETLEIAQALYETHKATTYP RSDSGYLPDSMFAEVPTVLDSLLKTDPGLRPLVDQLDRNQRSRAWNDSKVTAHHGIIPTLEPANLKAMNDKERAVYMLIR AHYLAQFLPQHEFDRTTARLSCAGETLQAVGKQVVVIGWRQVLAEPRPDDDGETTPRSQVLPALHEGLSCQITGIDCKAL KTSPPRPYTQGELVKAMKGVAKLVADPRLKQKLKDTTGIGTEATRANIIKGLLDRGYLQKKGRSVRASDAAFTLIDVVPG AIADPGMTAIWEQALDMIEAGQLTLDVFIDKQSAWITQLVQQYQGASLSIKVPQGPACPECGTAMRQRTGKSGPFWSCPR YPDCKGSQPIDNGKHKRAMPRKRNSSTRAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 78 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 76 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 63 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-173 | 50 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 2e-173 | 50 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-173 | 50 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 4e-169 | 49 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 1e-168 | 48 |
