Gene Information

Name : W5S_1486 (W5S_1486)
Accession : YP_006282452.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : Integrating conjugative element protein, PFL4710 family
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1632242 - 1633177 bp
Length : 936 bp
Strand : -
Note : -

DNA sequence :
ATGAAACGCTCACACCGCCTGCGCACCAGTATTGCCACCGTTTTGCTTACGGCTGCCAGCTCGTCGTTCGCCCTCAATAC
CGCCACCATCGTCGCCTCATCGCTATCCCCGGATTGCCTGGAATACCGGGTCACCGGGATCTGCTACTGGCTGCTTTGCA
CCAAGTTCGGCTGTTCGGTACGCACCTCCGTCAAAGTCAGGCACTACGTTCCCGACGCCGTGGTATCGAGCTACGGCAAC
ACGGGCGACAACCCGTGGGTTGAAGTGCGCGCCATGAGTATGCCCAACACCACGGCGCAGAGCGGTGGTGACGGCACCAG
CAACCATGGCAACGAGAACAATCTCTCCAGTTTCCGTAACGCGGACGTGATCGGCCACCCTGGCGGCCAGGCATTCAGCC
AGTTTGCCTCGTCATCAGGCTACATCTGCGACGGTACCGGCACCGCCTTCATGCCGTACCTGCTGAGCACACTCGATACC
ATCGCGTGGCGCTACAACATTCCCGAAGCGGTGTATCCCGAGGCGCTGATCCCCGGTATGCGCGAGATCGGTGCACGCAC
CACACTGAACCTGTGGGGCAACGTCTATCCACGTGGCGGTTTTCTGCATCAAGTGGACAGCTACAAGGCCAGCGCCGTGG
TCGCCCAACGGGCAGGCGATATCGTGACCCGCCGAGGACAACTGCACGTGTACCACCCCCTGCTCGCCAACGCACGCGAC
GGTTATTGGCCTGCAGGCGCACTGATGGAAAGCGATGCCTCGACCGGCAAATGGCAAGAACTGGCCCCTCGCCTGTCTGC
CTCCTGCGCGGTCTTCCCGCATAAAGAACCCCTGGTTCAGGCACAGCAAGGCGATTACGTCTGGGCACTCTGGCGACCCT
ATAGCTGCTGCCAACGACGCGGACAGACCTTTCTTGGCAGTGTGGACTTCAACTGA

Protein sequence :
MKRSHRLRTSIATVLLTAASSSFALNTATIVASSLSPDCLEYRVTGICYWLLCTKFGCSVRTSVKVRHYVPDAVVSSYGN
TGDNPWVEVRAMSMPNTTAQSGGDGTSNHGNENNLSSFRNADVIGHPGGQAFSQFASSSGYICDGTGTAFMPYLLSTLDT
IAWRYNIPEAVYPEALIPGMREIGARTTLNLWGNVYPRGGFLHQVDSYKASAVVAQRAGDIVTRRGQLHVYHPLLANARD
GYWPAGALMESDASTGKWQELAPRLSASCAVFPHKEPLVQAQQGDYVWALWRPYSCCQRRGQTFLGSVDFN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ORF C43 AAN62136.1 hypothetical protein Not tested PAGI-2(C) Protein 4e-122 79
ORF SG51 AAN62273.1 hypothetical protein Not tested PAGI-3(SG) Protein 1e-118 78
unnamed ABR13357.1 hypothetical protein Not tested PAGI-5 Protein 3e-98 67
pph89 CAI36130.1 hypothetical protein Not tested PPHGI-1 Protein 4e-107 66
RL017 AAP84144.1 conserved hypothetical protein Not tested PAPI-1 Protein 2e-96 66
EXA20 ABD94629.1 conserved hypothetical protein Not tested ExoU island A Protein 1e-98 65
YpsIP31758_3701 YP_001402655.1 hypothetical protein Not tested YAPI Protein 1e-75 50
api54 CAF28528.1 conserved hypothetical protein Not tested YAPI Protein 2e-75 50
Pmu_02990 YP_005176198.1 integrating conjugative element protein, PFL family Not tested ICEPmu1 Protein 2e-66 49
STY4576 NP_458661.1 hypothetical protein Not tested SPI-7 Protein 2e-79 48
t4273 NP_807871.1 hypothetical protein Not tested SPI-7 Protein 2e-79 48
YE3467 YP_001007628.1 hypothetical protein Not tested YAPI Protein 1e-69 48
PMI2573 YP_002152292.1 hypothetical protein Not tested Not named Protein 3e-65 47
unnamed AAX39458.1 unknown Not tested Hrp PAI Protein 1e-60 46