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Name : W5S_1485 (W5S_1485) Accession : YP_006282451.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Unknown Product : Membrane protein, Tfp pilus assembly, pilus retraction ATPase PilT Function : - COG functional category : - COG ID : - EC number : - Position : 1630834 - 1632231 bp Length : 1398 bp Strand : - Note : - DNA sequence : ATGAAACGGCTCGACCCGAAAGCGTTTTCCATTCCTGCGCCACGCCTGCGGCAACCCGCACTATTGGTTGCCGTACTGGC TCTGAACTGTGGCCTGGCGCAGGCACAGAACGGAGGCTTCCAGAACAGCGGTGCCGTCATTGGCGATGAGGTGATGTACT CCATCGGCGGCGGTAACGCCGTGTCGATGAGCGGTGCGGCCGGCATGCGCTCGATGGGTGTCGGTGTGGGTTGGAACAGC AACCTGATCTGCGGCGACATGAACATCAGTACCACAATCCAGAATCAGCTCAACGGGCTGACCAACGGCTTCCAGAACAT CATGAGCAACGTGATCCAGAACGCCACCAGCGCGGTCGCCTCATTGCCCGCGCTCATCATCCAGCGGGCCGACCCGGGGC TCTACAACCTGCTGACCAATGGCGTTCTGCAGGCTCGACTCGACTTTGACCGCTCCAAACTCTCCTGCCAGGCGATGGCT GAGCGCATGGCAGACACCGCAGGTGGTCAGCTCGGCTGGAACCAGATTGCCCAAGGCATGGCGCTGCGTCAGGCGGTCTC CAGTACCGATGCCGTTTCGGCTATTGAACAGGCTGAAAAAAACCGGGGCAACGACGGGGTGCCGTGGGTCGGTGGCAGCA ATGCCGGTGGAGCCGGTCAACGGTCAATCAAGGTCGTCAGCGATGTCACCCGTGCAGGTTACAACCTGGTCAATGGTCGC AATGTGGCAGACACCTCATCCATCGACACGGCAAATTGCCAAAGCCTGTCCTGCCAGACCTGGGCATCACCACAGCAGGC CATCGACTTTGCCACCCGCGTGTTGGGCGAGCAGGAACAGCGTACCTGCGAAGACTGCACCAAGACCGAGACCGTACCAG GCGTCGGGCTGACCCCAGTCATCCAGGACGAATACGACACCAAGCTGGAAGCCCTGCAGGCGCTGGTCAACGGAACCCGC AATACCACGTTCGAGAACCTTCGCGAAGCAGGCAGTGCCTCACTACCGATCACCCGCAGCGTCATCGAGGCACTGCGTGA CGAGCCTGATCAAGACATTCTGGCCCGACGCCTGGCCTCCGAAGTCGCGCTGGCATCGGTACTGGAAAAAGCCCTGCTGC TGCAACGTACGCTACTGACCGGCAAGAAAGAGCCAAACGTCGCCGCCAACCAATTGGCAGTCGCCGCCGTCGATCAGGAA AGCAACACGCTTGACCGCGAGATCCTCAATCTCAAAACCGAGCTTGAACTGCGCCGCGAACTTGCCAACAACTCGCCGAT GGCCATCATCCAGCGCCACAGCGCACGTGCAGCCGACTCACGTGGCATTTATGAAGGTGATCCCGTACCCAACCGTCTTG ACCAGTTGCAGCGTCCCAGCCCCGGAGGCACGCCATGA Protein sequence : MKRLDPKAFSIPAPRLRQPALLVAVLALNCGLAQAQNGGFQNSGAVIGDEVMYSIGGGNAVSMSGAAGMRSMGVGVGWNS NLICGDMNISTTIQNQLNGLTNGFQNIMSNVIQNATSAVASLPALIIQRADPGLYNLLTNGVLQARLDFDRSKLSCQAMA ERMADTAGGQLGWNQIAQGMALRQAVSSTDAVSAIEQAEKNRGNDGVPWVGGSNAGGAGQRSIKVVSDVTRAGYNLVNGR NVADTSSIDTANCQSLSCQTWASPQQAIDFATRVLGEQEQRTCEDCTKTETVPGVGLTPVIQDEYDTKLEALQALVNGTR NTTFENLREAGSASLPITRSVIEALRDEPDQDILARRLASEVALASVLEKALLLQRTLLTGKKEPNVAANQLAVAAVDQE SNTLDREILNLKTELELRRELANNSPMAIIQRHSARAADSRGIYEGDPVPNRLDQLQRPSPGGTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ORF C42 | AAN62135.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 2e-169 | 81 |
| ORF SG50 | AAN62272.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 7e-157 | 75 |
| pph90 | CAI36131.1 | hypothetical protein | Not tested | PPHGI-1 | Protein | 1e-136 | 63 |
| EXA19 | ABD94628.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 1e-128 | 63 |
| RL016 | AAP84143.1 | putative pathogenesis-related protein | Not tested | PAPI-1 | Protein | 4e-128 | 62 |
| unnamed | ABR13356.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 6e-126 | 62 |
| unnamed | AAX39459.1 | unknown | Not tested | Hrp PAI | Protein | 2e-78 | 43 |
| YE3466 | YP_001007627.1 | hypothetical protein | Not tested | YAPI | Protein | 5e-75 | 42 |
| api55 | CAF28529.1 | putative exported protein | Not tested | YAPI | Protein | 4e-75 | 42 |
| YpsIP31758_3700 | YP_001402654.1 | hypothetical protein | Not tested | YAPI | Protein | 1e-74 | 42 |
| STY4577 | NP_458662.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-77 | 41 |
| t4274 | NP_807872.1 | hypothetical protein | Not tested | SPI-7 | Protein | 3e-77 | 41 |
