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Name : W5S_1480 (W5S_1480) Accession : YP_006282446.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Unknown Product : IS100 transposase orfA Function : - COG functional category : - COG ID : - EC number : - Position : 1626747 - 1627769 bp Length : 1023 bp Strand : - Note : - DNA sequence : ATGATCACTTTTGAGATTCGTATGGAAATTAAAGTCCTGCACAAGCGGGGAATGAGTATCCGGGCCATCGCCAGGGAACT GAGTATTTCGCGCAATACTGTCCGCAGCCACCTGAAAGCCAAATCTGAAAAGCCGCAGTATTCACCACGCCCGGCACCAT CATCACTGCTCGATGAATACCGTGATTACATCTCTAAGCGGATCAGCGAAGCGCATCCCTACAAAATCCCGGCGACCGTT ATTGCCAGGGAAATCATGGAGCTGGGCTATCGTGGAGGGCTGACTATCCTGAGAGAGTTCATTCGTTCGCAGACACTCCC TGTCGTGGCCGAACCGATCGTTCGCTTCGAAACTGAACCCGGGCTGCAGATGCAGGTTGACTGGGGGACCATGCGAAACG GCAAGTCACCCCTGCATGTATTCGTTGCTGTTCTGGGGTACAGCAGAATGCTTTACATCGAGTTCACCGACAACATGCGT TACGACACGCTGGAATCCTGTCACCGCAATGCGTTCAGCTTCTTCGGCGGTGTACCGCAGGAAGTTCTGTACGACAATAT GAAAACGGTGGTACTCCAGCGAGATGCTTACCAGACCGGGCAGCACCGGTTCCATCCCTCCCTGTGGCAGTTCGGCAAAG AGATGGGCTTCTCTCCCCGGCTGTGTCGCCCCTTCAGGGCACAGACTAAGGGCAAGGTGGAGCGGATGGTGCAGTACACC CGCAACAGCTTCTATATCCCGTTAATGACGCGCCTGCGCCCGATGGGGATCACCGTTGATGTTGAAACCGCAAACCGTTA CGGCCTGCGCTGGCTGTACGATGTGGCCAACCAACGAAAGCATGAAACTATCCAGACCCGCCCCTGCGATCGCTGGGTGG AGGAACAGCAATCCATGCTGGCACTGCCACCGGAGAAAAAACAGTATGATGTGCAGGTCGACGAAAGCCTGGTGACCTTC GACAGGCAGCCGTTACATCATCCGCTGTCCATCTATGACACGTTCTGCAGAGGAGCCGCATGA Protein sequence : MITFEIRMEIKVLHKRGMSIRAIARELSISRNTVRSHLKAKSEKPQYSPRPAPSSLLDEYRDYISKRISEAHPYKIPATV IAREIMELGYRGGLTILREFIRSQTLPVVAEPIVRFETEPGLQMQVDWGTMRNGKSPLHVFVAVLGYSRMLYIEFTDNMR YDTLESCHRNAFSFFGGVPQEVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT RNSFYIPLMTRLRPMGITVDVETANRYGLRWLYDVANQRKHETIQTRPCDRWVEEQQSMLALPPEKKQYDVQVDESLVTF DRQPLHHPLSIYDTFCRGAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| y1093 | YP_002346890.1 | transposase for insertion sequence IS100 | Not tested | HPI | Protein | 9e-146 | 86 |
| y2411 | NP_669718.1 | transposase | Not tested | HPI | Protein | 9e-146 | 86 |
| unnamed | CAB46599.1 | IS100 transposase | Not tested | HPI | Protein | 7e-146 | 86 |
| YPTB1585 | YP_070113.1 | transposase | Not tested | HPI | Protein | 9e-146 | 86 |
| api83 | CAF28557.1 | transposase | Not tested | YAPI | Protein | 7e-146 | 86 |
| unnamed | CAA21403.1 | - | Not tested | HPI | Protein | 9e-146 | 86 |
| s0035 | CAD33773.1 | ORF A protein | Not tested | PAI I 536 | Protein | 2e-145 | 85 |
| y1094 | CAD42088.1 | OrfA protein of IS100 transposase | Not tested | PAI II 536 | Protein | 2e-145 | 85 |
| orfA | CAE85182.1 | OrfA protein, transposase, IS100 | Not tested | PAI V 536 | Protein | 2e-145 | 85 |
| y1094 | CAC43410.1 | IS100 transposase; transposase ORFA | Not tested | PAI III 536 | Protein | 2e-145 | 85 |
| y1093 | CAD33720.1 | ORF A protein | Not tested | PAI I 536 | Protein | 9e-145 | 85 |
| unnamed | AAG37051.1 | unknown | Not tested | espC PAI | Protein | 2e-136 | 83 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_1480 | YP_006282446.1 | IS100 transposase orfA | VFG1607 | Protein | 1e-145 | 85 |
| W5S_1480 | YP_006282446.1 | IS100 transposase orfA | VFG1461 | Protein | 5e-145 | 85 |
| W5S_1480 | YP_006282446.1 | IS100 transposase orfA | VFG1514 | Protein | 1e-145 | 85 |
| W5S_1480 | YP_006282446.1 | IS100 transposase orfA | VFG1626 | Protein | 1e-145 | 85 |
| W5S_1480 | YP_006282446.1 | IS100 transposase orfA | VFG0780 | Protein | 1e-136 | 83 |
