Gene Information

Name : W5S_1439 (W5S_1439)
Accession : YP_006282410.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Resistance
Product : Antisigma-factor antagonist, STAS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1582815 - 1584314 bp
Length : 1500 bp
Strand : -
Note : -

DNA sequence :
ATGATTCCATCCTCCAATGCAACGCCGACGTTGGTTCAATCAACCACGTCAACGCTTGCGGCCTTACGCTCGCCCTCGCT
GCTGATGCGAGAAATTTTGGCAGGCACTATCACCGCGCTGGCGCTTATTCCAGAAGTGATTTCGTTTTCTATCATTGCGG
GCGTAGACCCAAAAGTCAGCCTGATCGCCTCTATTGTCTTGTGCTTCACCATGTCCTTTCTCGGCGGCAGACCGGCGATG
GTTACCGCGGCGGCAGGTGCCGTGGCGCTGGTTATCGGGCCGATGGTGCACGCACACGGCGTAGCCTATATTCTGCCGGC
GGTGATTATGGCAGGGATCATCCAGATCCTGTTTGGGCTTGCAGGGTTGGCGAGAATGATGCGCTACATTCCCCGCTCGG
TGATGATCGGTTTCGTGAATGCGCTAGGCATCCTGATTTTCGCCGCACAGGTGCCGCATGTTTACGGGCAATCTTCGCTG
GTCTGGTTACTGTTTGCGTTAACGGTAGCGATTGTCTTGCTGCTACCTTATGTGGTGAAAAGTATTCCTGCACCGCTGGT
GGCGATTGTGGCCGTGACAGCGATTGCCATGTTTACTGGCATCACGGTGCCTAACGTCGGCGATGCTGGCCCTATGCAGC
CCGGATTGCCAAGTTTCACTCAATGGCTGGTGCCATTCAATTTTGAAACGCTACGCATCATCTGGCCGACCGCGCTCAGC
ATTGCCTTCGTCGGGCTGATGGAATCGCTGCTAACCGCAAAACTGGTCGACGACATCACGGATACCCCGTCCAGCAAGCG
CCGCGAATGCTGGGGGCTGGGAGTTTCAAATATCTTTGCCGGATTCTACGGCGGCATTGCCGGGTGTGCGATGATCGGGC
AAACCGTGGTCAATGTGGAGTTAGGGAAAGCGCGAACACGTATCTCTACTCTCGCCGCCGCACTGGTGCTGTTGCTACTG
GTAACAGGTCTGAGCGAAATCATGGCTAAGATTCCGATGGTCGTGCTGGCAGGAATTATGATGATTGTCGCGCTGAAAAC
GATGAACTGGCATAGCCTGCACCCCACCACGCTAAAACGGATGCCGCTATCGGAAACGCTGGTGGTCGTGGTAACGGTTA
TCGCCACCGTCTCAACGGGGAATCTGGCTATCGGCGTGGCGGGTGGCGTTATCTTTGCCATCCTGCTGTTTGCACGCCGC
GTGGCGCACGTCATTCATGCGGAACGTCGCGTGAGCGAAGACGGGCAGTCGGTGCACTACACGGTACGCGGGCCGCTATT
CTTCGGCAGCAGCAACGATCTCTTCGAGCACTTCCTGTATGCGCAGGACCCACAGAACGTCACTATCGACCTGACGCACG
CCCAAATCTGGGATGCCTCCAGCGTGGCGGCGCTCGACGCGATCGAAACCCGCTATCACCGTTACGAGGCGAAAGTCGCG
ATCGTCGGGCTGGATAACCACAGTAGCAAAATCCACCAGCGCCTGTCAGGGCATCTCTGA

Protein sequence :
MIPSSNATPTLVQSTTSTLAALRSPSLLMREILAGTITALALIPEVISFSIIAGVDPKVSLIASIVLCFTMSFLGGRPAM
VTAAAGAVALVIGPMVHAHGVAYILPAVIMAGIIQILFGLAGLARMMRYIPRSVMIGFVNALGILIFAAQVPHVYGQSSL
VWLLFALTVAIVLLLPYVVKSIPAPLVAIVAVTAIAMFTGITVPNVGDAGPMQPGLPSFTQWLVPFNFETLRIIWPTALS
IAFVGLMESLLTAKLVDDITDTPSSKRRECWGLGVSNIFAGFYGGIAGCAMIGQTVVNVELGKARTRISTLAAALVLLLL
VTGLSEIMAKIPMVVLAGIMMIVALKTMNWHSLHPTTLKRMPLSETLVVVVTVIATVSTGNLAIGVAGGVIFAILLFARR
VAHVIHAERRVSEDGQSVHYTVRGPLFFGSSNDLFEHFLYAQDPQNVTIDLTHAQIWDASSVAALDAIETRYHRYEAKVA
IVGLDNHSSKIHQRLSGHL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ABTW07_3869 YP_005797117.1 sulfate permease Not tested AbaR4e Protein 6e-78 44
unnamed AEO37462.1 Sup* Not tested AbaR4 Protein 5e-78 44
sup AFV47947.1 sulphate premease Sup Not tested AbaR25 Protein 8e-78 44
ABTW07_3910 YP_005797158.1 sul1delta fusion protein Not tested AbaR4e Protein 1e-77 44
sup AFV47978.1 sulphate premease Sup Not tested delta-AbaR25 Protein 8e-78 44
sup AEQ20903.1 sulphate permease Not tested Tn6166 Protein 1e-77 44
ABK1_0240 YP_005512812.1 Sul1delta fusion protein Not tested AbaR4d Protein 1e-77 44
sup AEZ06030.1 sulphate permease Not tested Tn6167 Protein 1e-77 44
BJAB07104_00259 YP_008207724.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 1e-77 44
BJAB07104_00275 YP_008207740.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR25 Protein 1e-77 44
BJAB0868_00263 YP_008211589.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 1e-77 44
BJAB0868_00279 YP_008211605.1 Sulfate permease and related transporters (MFS superfamily) Not tested AbaR26 Protein 1e-77 44
ABZJ_00239 YP_005524195.1 sul1delta fusion protein Not tested AbaR22 Protein 1e-77 44
sup AFH57200.1 sulfate permease Not tested AbaR4a Protein 8e-78 44
ABZJ_00258 YP_005524214.1 sul1delta fusion protein Not tested AbaR22 Protein 1e-77 44
sup ACN81033.1 sulphate permease Not tested AbaR5 Protein 2e-72 43
sulI CAJ77098.1 sulfate permease Not tested AbaR1 Protein 1e-72 43
sup AGK36657.1 sulphate permease Not tested AbaR26 Protein 1e-72 43
ACICU_00239 YP_001844898.1 MFS superfamily sulfate permease Not tested AbaR20 Protein 2e-72 43