Gene Information

Name : W5S_1375 (W5S_1375)
Accession : YP_006282346.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : putative aminotransferase yfbQ
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1505628 - 1506842 bp
Length : 1215 bp
Strand : -
Note : -

DNA sequence :
ATGTCTCCGATTGAAAAATCCAAGAAACTGGAGAACGTATGCTATGACATCCGTGGCCCAGTTCTAAAGGAAGCCAAGCG
GCTTGAAGAAGAAGGTAATAAGGTCCTTAAACTGAATATTGGCAACCCTGCGCCTTTCGGCTTTGAGGCACCGGACGAAA
TTCTGGTCGATGTCATCCGTAACCTGCCAACAGCACAGGGCTACTGTGATTCCAAAGGGCTCTATTCCGCCCGTAAAGCC
ATCGTTCAGCACTATCAGGCGCGGGATATGCGCGATATGACGGTTGAAGACGTCTATATTGGCAACGGTGTTTCCGAACT
CATTGTACAATCCATGCAGGCGCTGCTCAATCCGGGCGATGAAATGCTGGTTCCCGCACCGGATTACCCTCTCTGGACCG
CGGCGGTTTCCCTGTCTAACGGCAATGCCGTTCACTATCTCTGCGATGAGTCCTCCGATTGGTTCCCCGATCTGGATGAT
ATCCGTAAAAAGATCACTGCTAACACTCGCGGTATTGTCATCATCAACCCGAACAACCCGACGGGTGCGGTCTACAGCAA
AGAACTGTTGCTGGATATCGTGTCTATCGCGCGTGAACATAACCTGATTATTTTCGCCGACGAAATTTACGACAAAATTC
TGTATGACGATGCGCAACACCACTCGATTGCCGCTCTGGCACCGGACCTGCTGACAGTCACGTTCAACGGGCTGTCCAAG
ACATACCGTGTGGCAGGTTTCCGTCAAGGCTGGATGGTACTGAACGGCCCGAAAAAACACGCAAAAGGCTATATTGAAGG
ACTCGAAATGCTGGCTTCAATGCGTTTGTGTGCCAACGTGCCGATGCAGCATGCGATTCAGACCGCGTTGGGGGGATATC
AAAGCATCAGCGAATTTATTCAACCCGGCGGGCGCCTGTATGAACAGCGTAACCGCTCCTGGGAATTGATCAATCAAATC
CCCGGCGTATCGTGCGTAAAACCACGAGGGGCGCTCTATATGTTCCCACGCATTGATGCCAAGCGCTTTAATATCCATGA
CGACCAAAAACTGGTACTGGATCTGCTGTTGCAGGAAAAGGTGCTACTGGTTCAGGGCACAGCGTTTAACTGGCCTTACC
CAGACCATGTACGCATCGTCACGCTACCGCGTATTGATGAGCTGGACATGGCAATCCACAAATTAGGGCGTTTCCTGGGG
CATTATCATCAATAA

Protein sequence :
MSPIEKSKKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFEAPDEILVDVIRNLPTAQGYCDSKGLYSARKA
IVQHYQARDMRDMTVEDVYIGNGVSELIVQSMQALLNPGDEMLVPAPDYPLWTAAVSLSNGNAVHYLCDESSDWFPDLDD
IRKKITANTRGIVIINPNNPTGAVYSKELLLDIVSIAREHNLIIFADEIYDKILYDDAQHHSIAALAPDLLTVTFNGLSK
TYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPMQHAIQTALGGYQSISEFIQPGGRLYEQRNRSWELINQI
PGVSCVKPRGALYMFPRIDAKRFNIHDDQKLVLDLLLQEKVLLVQGTAFNWPYPDHVRIVTLPRIDELDMAIHKLGRFLG
HYHQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-117 63
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-117 63
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 3e-117 63
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-117 63