Gene Information

Name : W5S_1298 (W5S_1298)
Accession : YP_006282270.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Virulence
Product : General secretion pathway protein G
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1427109 - 1427549 bp
Length : 441 bp
Strand : +
Note : -

DNA sequence : 
ATGCAACAGTATCAACGTGGTCATAGTCAGCGTGGTTTTACCCTGTTGGAAATTATGGTGGTGATTGTCATTCTCGGCGT
GCTGGCGAGTTTGGTGGTGCCCAATCTGATGGGGAATAAAGAAAAGGCGGATCGACAAAAAGCCGTCAGCGATATTGTCT
CTCTGGAAAGCGCACTCGATATGTACAAGCTGGATAACAACCGTTATCCGTCCACAGAGCAGGGGCTGAAAGCGTTGGTG
ACGAAGCCGACGGTACAACCGGAACCGCGTAACTACCCGGCCGATGGCTATATTCGCCGCCTGCCGCAGGATCCGTGGGG
TACAGACTACCAACTGTTAAACCCGGGTCAGCACGGCAAGTTAGATATCTTCTCCTTGGGGCCAGATGGCATGCCGGGAA
CGGAAGATGATATCGGCAACTGGAATCTTGATAAAAAATAA

Protein sequence : 
MQQYQRGHSQRGFTLLEIMVVIVILGVLASLVVPNLMGNKEKADRQKAVSDIVSLESALDMYKLDNNRYPSTEQGLKALV
TKPTVQPEPRNYPADGYIRRLPQDPWGTDYQLLNPGQHGKLDIFSLGPDGMPGTEDDIGNWNLDKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 5e-44 65
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 3e-44 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_1298 YP_006282270.1 General secretion pathway protein G VFG2050 Protein 1e-44 65
W5S_1298 YP_006282270.1 General secretion pathway protein G VFG0180 Protein 2e-34 56
W5S_1298 YP_006282270.1 General secretion pathway protein G VFG1871 Protein 2e-33 53