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Name : W5S_1297 (W5S_1297) Accession : YP_006282269.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Virulence Product : General secretion pathway protein F Function : - COG functional category : - COG ID : - EC number : - Position : 1425850 - 1427076 bp Length : 1227 bp Strand : + Note : - DNA sequence : ATGGCACAGTACCAATATCAAGCGCTGGATGCGCAGGGGAAAAAATGCCGTGGCAGTCAGGAGGCGGACTCCGCCAGACA GGCGCGCCAGCTATTGCGGGAACGTGGACTGGTGCCGTTGTCGGTTGATGAAAGCCGAGGCGACCAGCAGAAAACTCGTT CTACGGGATTCTCCCTACGCCGAAAAATTCGTATTAGTACCTCAGATTTAGCGCTGTTGACGCGCCAGTTAGCCACGCTG GTGGCGGCATCGCTGCCGCTGGAAGAAGCGCTGGATGCGGTGGCGAAGCAGAGTGAAAAGCCGCATCTGAGCCAGTTGAT GGCGGCGGTACGCAGCAAGGTGATGGAAGGCCACTCGTTGGCCGATGCCATGAAGTGTTTTCCCAGTAGCTTTGAACGGC TGTATTGCGCAATGGTCGCAGCAGGCGAGACGTCCGGTCACCTTGATGCCGTGTTGAATCGGCTGGCGGACTACACCGAG CAGCGACAACAGATGCGTAGCCGCATACAGCAGGCAATGATCTACCCCTGTGTGTTAACCGTGGTCGCGATTGCGGTGGT CAGTATTTTGCTGTCCGTCGTGGTGCCGAAGGTCGTCGAGCAATTTATTCACATGAAGCAGGCGTTGCCACTTTCTACCC GAGTTTTGATGGGGATGAGCGATGCCGTGCGCACGTTTGGGCCGTGGTTTCTATTGGCATTACTGGCTGGATTTATGGCG CTGCGGGTGATGCTGCGGCAGGAAAAGCGGCGCGTTAATTTTCATCGACGCCTGCTGCATTTACCGCTGCTTGGGCGTAT CGCTCGCGGCTTGAATACAGCACGCTACGCGCGGACGCTCAGCATTCTCAACGCCAGTGCCGTGCCGCTGTTACAGGCGA TGCGCATTAGTGGTGATGTAATGAGCAATGATTACGCCCGCCATCGGCTCTCGATGGCAACGGATGCGGTGCGAGAGGGC GTCAGTCTGCACAAGGCGCTGGAACAGACGGCGCTCTTTCCCCCGATGATGCGCCATATGATTGCCAGCGGTGAGCGCAG CGGCGAGTTGGACAGCATGCTGGAACGGGCAGCGGATAATCAGGATCGTGAATTCAGTTCGCAGATGACGCTGGCGCTGG GGTTATTTGAACCTCTGCTGGTGGTTAGCATGGCGGCAGTGGTGTTGTTTATCGTATTGGCGATTTTACAACCGATTCTG CAACTGAATACGTTAATGAGTTCGTAA Protein sequence : MAQYQYQALDAQGKKCRGSQEADSARQARQLLRERGLVPLSVDESRGDQQKTRSTGFSLRRKIRISTSDLALLTRQLATL VAASLPLEEALDAVAKQSEKPHLSQLMAAVRSKVMEGHSLADAMKCFPSSFERLYCAMVAAGETSGHLDAVLNRLADYTE QRQQMRSRIQQAMIYPCVLTVVAIAVVSILLSVVVPKVVEQFIHMKQALPLSTRVLMGMSDAVRTFGPWFLLALLAGFMA LRVMLRQEKRRVNFHRRLLHLPLLGRIARGLNTARYARTLSILNASAVPLLQAMRISGDVMSNDYARHRLSMATDAVREG VSLHKALEQTALFPPMMRHMIASGERSGELDSMLERAADNQDREFSSQMTLALGLFEPLLVVSMAAVVLFIVLAILQPIL QLNTLMSS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 3e-84 | 55 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 7e-84 | 54 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_1297 | YP_006282269.1 | General secretion pathway protein F | VFG2049 | Protein | 1e-81 | 54 |
| W5S_1297 | YP_006282269.1 | General secretion pathway protein F | VFG0181 | Protein | 1e-80 | 52 |
| W5S_1297 | YP_006282269.1 | General secretion pathway protein F | VFG1870 | Protein | 3e-65 | 43 |
