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Name : W5S_1295 (W5S_1295) Accession : YP_006282267.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Virulence Product : General secretion pathway protein D Function : - COG functional category : - COG ID : - EC number : - Position : 1422268 - 1424355 bp Length : 2088 bp Strand : + Note : - DNA sequence : ATGGTCAACAGCAAGATATATATCTGGCACTGGATGGAGACCACTAATTTGTTTAGCAAGGGACAGGGATTTTTTAAGCG TCAGGTTTTTTCGAAATATAAAAACCAATGGCTTGGTCATGTACGCCGCAAGAGCATGTTATTGCTTGGCGGGAGTGTTT TGCTGATGGCGTCATCGTTAGCGTGGAGCGCTGAGTTCTCCGCCAGCTTCAAAGGTACGGATATTCAGGAGTTTATCAAT ACCGTCAGTAAGAATCTGAATAAGACCGTTATTATCGATCCGTCGGTCAGCGGAACGATTACCGTTCGCAGCTATGACAT GATGAACGAAGAGCAGTATTACCAGTTCTTCCTTAGCGTGTTGGATGTCTACGGATTTACTGTTATTCCTATGGATAACA ATGTATTGAAGATTATTCGCTCAAAAGATGCGAAATCGACATCTATGCCGCTGGCGAGCGATGAGCAGCCGGGTATCGGC GATGAAGTCGTTACGCGCGTCGTGCCAGTTAACAATGTAGCGGCACGCGATTTGGCACCGCTGCTGCGCCAGTTGAACGA CAACGCGGGTGCCGGGAGTGTGGTGCATTACGAACCCTCGAACGTGTTGCTGATGACTGGGCGCGCGGGTGTCATCAAGC GGCTGATGACGATCGTCGAACGGGTTGATCAGACGGGCGATCGGAATGTCACCAGTATCCCACTGTCTTACGCGTCCTCG ACGGAAGTGGTGAAGATGGTGAACGAACTGAACAAGATGGATGAGAAATCTGCCTTGCCGGGGATGTTGACCGCGAATGT GGTGGCCGACGAACGAACCAACTCCGTGCTGGTACGTGGCGAACCGAATTCACGCCAGCGCGTTATCGATATGGTCAAGC AGCTCGATCGCCAGCAGGCGGTGCAGGGCAATACTAAAGTCATCTATCTCAAATACGCCAAGGCCGCCGATTTGGTCGAA GTGCTTACGGGCGTAGGTGACAGTATCCAAACTGATCAACAGAATGCGTTGCCCGCGCTGCGTAAAGACATTTCGATTAA GGCGCATGAGCAAACCAACTCGCTGATTGTGAATGCCGCGCCTGACATTATGCGCGATCTGGAACAGGTGATTGCACAGT TGGATATCCGTCGTCCGCAGGTATTAGTCGAAGCGATCATCGCGGAAGTACAAGATGCCGATGGGATGAATCTGGGCGTG CAGTGGGCTAATAAAAATGCCGGGACGACGCAATTCACGAATACCGGGTTACCGATCACGACCATGATGGCGGGAGCGGA CCAGTTTCGGCGTAATGGGACGCTTAGCACGGCAGCGACGAGTGCACTTGGCAGTTTCAACGGGATTGCCGCCGGTTTCT ATCAGGGGAACTGGAGCATGCTGATGACGGCGCTGTCCAGCAACAGTAAGAACGATATTCTGGCAACCCCGAGCATTGTA ACGCTGGACAATATGGAAGCGACGTTTAACGTCGGCCAGGAAGTGCCTGTATTAGCGGGTTCGCAAACGACATCCGGCGA CAACGTTTTCCAAACGGTGGAACGTAAAACGGTCGGTATCAAACTGAAGGTGAAACCCCAAATCAACGAAGGCGATTCCG TTCTACTGGAAATCGAGCAGGAAGTCTCCAGCGTAGCAGATGCCGCCTCCAGCAGCAGTGCTGAACTGGGCGCAACATTC AATACGCGCACCGTTAATAACGCAGTGTTGGTCAGCAGTGGCGAAACCGTTGTGGTGGGGGGGTTGTTGGATAAAAGTAC GCGTGAGTCTGCCAGTAAAGTCCCCCTATTGGGGGATATTCCGATTCTGGGGCACTTGTTCCGATCCAACAGTCAGGAAA CGTCAAAGCGTAATCTGATGCTGTTTATCCGTCCTTCCATTATCCGCGATCGTAGCGAATACCAGAGCGCCTCTGCCAGT AAGTATCGCTCATTCAACAATGAAGAAGAGAAGCAGCGAAATGTGAGTAACGGTGAGGGAGGGCTGCTGGATAACGACTT GCTGCGCTTACCTGAGGGGGGGAACGCCCATACGTTCCGTCAGGTTCAGTCCTCTATCGTGGCATTTTACCCGGCAGGCG GGAAATGA Protein sequence : MVNSKIYIWHWMETTNLFSKGQGFFKRQVFSKYKNQWLGHVRRKSMLLLGGSVLLMASSLAWSAEFSASFKGTDIQEFIN TVSKNLNKTVIIDPSVSGTITVRSYDMMNEEQYYQFFLSVLDVYGFTVIPMDNNVLKIIRSKDAKSTSMPLASDEQPGIG DEVVTRVVPVNNVAARDLAPLLRQLNDNAGAGSVVHYEPSNVLLMTGRAGVIKRLMTIVERVDQTGDRNVTSIPLSYASS TEVVKMVNELNKMDEKSALPGMLTANVVADERTNSVLVRGEPNSRQRVIDMVKQLDRQQAVQGNTKVIYLKYAKAADLVE VLTGVGDSIQTDQQNALPALRKDISIKAHEQTNSLIVNAAPDIMRDLEQVIAQLDIRRPQVLVEAIIAEVQDADGMNLGV QWANKNAGTTQFTNTGLPITTMMAGADQFRRNGTLSTAATSALGSFNGIAAGFYQGNWSMLMTALSSNSKNDILATPSIV TLDNMEATFNVGQEVPVLAGSQTTSGDNVFQTVERKTVGIKLKVKPQINEGDSVLLEIEQEVSSVADAASSSSAELGATF NTRTVNNAVLVSSGETVVVGGLLDKSTRESASKVPLLGDIPILGHLFRSNSQETSKRNLMLFIRPSIIRDRSEYQSASAS KYRSFNNEEEKQRNVSNGEGGLLDNDLLRLPEGGNAHTFRQVQSSIVAFYPAGGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspD | CAE85234.1 | GspD, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 4e-118 | 45 |
| gspD | YP_854407.1 | type II secretion protein GspD | Not tested | PAI I APEC-O1 | Protein | 2e-126 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_1295 | YP_006282267.1 | General secretion pathway protein D | VFG2047 | Protein | 7e-117 | 43 |
