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Name : W5S_1285 (W5S_1285) Accession : YP_006282258.1 Strain : Pectobacterium sp. SCC3193 Genome accession: NC_017845 Putative virulence/resistance : Unknown Product : Putative prophage CPS-53 integrase, CPS-53 (KpLE1) prophage Function : - COG functional category : - COG ID : - EC number : - Position : 1409607 - 1410821 bp Length : 1215 bp Strand : - Note : - DNA sequence : ATGCCACTTAATGCTCGACAGATAGAAACCGCCAAGCCACAAGACACAGAGTACAAACTCACTGACGGCGCAGGCCTTTA TCTTCTGATAAAGCCGAATGGAGCCAAATATTGGCGCTTGAAGTACCGCGTTGCAGGTAAAGAGAAAAAATTATCTATCG GTGTTTATCCTGATATCTCGCTGGCAGAGGCTCGCCTAAAACGCGAAGAAGCTCGCAAAATCGTCGCTTCTGGTGGCGAT CCTAGTGAACAAAAGCAGGTCGAAAGACAGGCTAAGAAAATCAGCATTGATAACACCTTCAAAGCTATCGCTCTCGAATG GCATGAATATAAGCGCCCTAACTGGTCAAAGGGATACGCTGAAGACCTGATGGAAGCGTTTGAGAATGACATCTTCCCTG ATATCGGCAAACGCCCTATTGCTGAGATTAAGCCGCTGGAAATGCTAACCTCACTGCGCAAACTTGAAAAACGTGGCGTA CTCGACAAGTTGCGTAAGATTCGCCAAGCCTGTAATCAGGTGTTCCGTTATGCGATTGTCACTGGGCGGGCGGAAAACAA CCCAGCGTCAGAACTGGCAAGTGCCCTTCCGCCCCCCAAGGCCACGCACTACCCTCACCTGTTGCCTGATGAACTACCGG ATTTTCTACGCGCGTTATCAACGTATTCGGGGAGTAAGGTCACACAACTGGCAACACGTATCCTGATGCTTACCGGCGTT CGCACTATCGAGTTACGACAAGCAGAATGGAAGGAGTTTGATTTTGAAAAAGGGCTCTGGGAAGTACCGAAAGAACGCAT GAAAATGCGTCGCCCCCACCTCGTTCCCCTCTCCGATCAAGTGATCGATGCGCTGCAACAACTCCGCGCCGTTACCGGAC GCTACAATCTGGTTTTCCCTGGACGTAACGACATCACCAAGCCGATGAGTGAAGCCAGTATTAATCAGGTACTGAAACGA ATTGGTTATCACGGTAAAGCAACAGGCCACGGCTTTCGCCACACGATGAGTACCATACTGCACGAACAAGGCTATAACAC CGCCTGGATCGAATTGCAGCTTGCTCATGTGGATAAGAACACCATTCGTGGCACTTATAACCATGCGCAGTATTTGGAAC AACGTAGGGGTATGTTGCAGTGGTATGGGGATTTTATTGATGGGCTGGAGCATGGGGATGTGAAGAAGGTTGTGGTGATG GGGAAACGGAAGTAG Protein sequence : MPLNARQIETAKPQDTEYKLTDGAGLYLLIKPNGAKYWRLKYRVAGKEKKLSIGVYPDISLAEARLKREEARKIVASGGD PSEQKQVERQAKKISIDNTFKAIALEWHEYKRPNWSKGYAEDLMEAFENDIFPDIGKRPIAEIKPLEMLTSLRKLEKRGV LDKLRKIRQACNQVFRYAIVTGRAENNPASELASALPPPKATHYPHLLPDELPDFLRALSTYSGSKVTQLATRILMLTGV RTIELRQAEWKEFDFEKGLWEVPKERMKMRRPHLVPLSDQVIDALQQLRAVTGRYNLVFPGRNDITKPMSEASINQVLKR IGYHGKATGHGFRHTMSTILHEQGYNTAWIELQLAHVDKNTIRGTYNHAQYLEQRRGMLQWYGDFIDGLEHGDVKKVVVM GKRK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AFX83955.1 | integrase | Not tested | SE-PAI | Protein | 4e-133 | 67 |
| intL | NP_290239.1 | integrase for prophage 933L and the LEE pathogenicity island | Not tested | LEE | Protein | 4e-121 | 63 |
| int | AAC31482.1 | CP4-like integrase | Not tested | LEE | Protein | 3e-121 | 63 |
| ECs4534 | NP_312561.1 | integrase | Not tested | LEE | Protein | 4e-121 | 63 |
| int | ACU09430.1 | integrase | Not tested | LEE | Protein | 3e-121 | 63 |
| int | CAC39282.1 | integrase | Not tested | LPA | Protein | 2e-121 | 63 |
| aec33 | AAW51716.1 | Int | Not tested | AGI-3 | Protein | 1e-121 | 63 |
| int | AAD44730.1 | Int | Not tested | SHI-2 | Protein | 4e-120 | 63 |
| int | AAD54663.1 | Sai integrase | Not tested | SHI-2 | Protein | 5e-120 | 63 |
| S4835 | NP_839238.1 | integrase | Not tested | SHI-2 | Protein | 6e-120 | 63 |
| SF3698 | NP_709437.1 | integrase | Not tested | SHI-2 | Protein | 6e-120 | 63 |
| ESA_03025 | YP_001439090.1 | hypothetical protein | Not tested | Not named | Protein | 1e-122 | 62 |
| SESS1296_03598 | AFO66301.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 2e-71 | 43 |
| SESS1635_03816 | AFO66367.1 | bacteriophage integrase | Not tested | SESS LEE | Protein | 2e-71 | 43 |
| STY4821 | NP_458899.1 | integrase | Not tested | SPI-10 | Protein | 8e-68 | 41 |
| ORF_1 | AAZ04412.1 | phage integrase | Not tested | PAI I APEC-O1 | Protein | 1e-71 | 41 |
| APECO1_3534 | YP_854214.1 | P4-like integrase | Not tested | PAI I APEC-O1 | Protein | 2e-71 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| W5S_1285 | YP_006282258.1 | Putative prophage CPS-53 integrase, CPS-53 (KpLE1) prophage | VFG0783 | Protein | 2e-121 | 63 |
| W5S_1285 | YP_006282258.1 | Putative prophage CPS-53 integrase, CPS-53 (KpLE1) prophage | VFG0598 | Protein | 3e-120 | 63 |
