Gene Information

Name : W5S_1282 (W5S_1282)
Accession : YP_006282255.1
Strain : Pectobacterium sp. SCC3193
Genome accession: NC_017845
Putative virulence/resistance : Unknown
Product : IS3 family element, transposase orfB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1407107 - 1407343 bp
Length : 237 bp
Strand : -
Note : -

DNA sequence :
ATGAAAGACAACGTCTTACGCTGCTCAATGAGTGGAAAGGGTTGCTGTTACGACAATGCGGTAATGGAAAGCTTCTATCG
CACGCTGAAAACGGAGTTGATGCAGGGCAAAGCGTTTGTCAGCAGAGAACTGGTGATGAACGCTCTGTTTGATTATATTG
AGGTGTTTTACAATCGCCGCCGCAAACATTCGACGCTGGGTTATCAAACGCCGGTGGATGATGAAATGGCGGCGTAA

Protein sequence :
MKDNVLRCSMSGKGCCYDNAVMESFYRTLKTELMQGKAFVSRELVMNALFDYIEVFYNRRRKHSTLGYQTPVDDEMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0166 YP_281530.1 transposase Not tested Not named Protein 2e-11 52
unnamed CAD42036.1 hypothetical protein Not tested PAI II 536 Protein 1e-06 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
W5S_1282 YP_006282255.1 IS3 family element, transposase orfB VFG1555 Protein 4e-07 41